KEGG   Nakamurella sp. PAMC28650: H7F38_18455
Entry
H7F38_18455       CDS       T08954                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
naka  Nakamurella sp. PAMC28650
Pathway
naka03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:naka00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    H7F38_18455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:naka03400]
    H7F38_18455
DNA repair and recombination proteins [BR:naka03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     H7F38_18455
SSDB
Motif
Pfam: Ku DUF4246
Other DBs
NCBI-ProteinID: QNK80173
LinkDB
Position
complement(4083360..4084364)
AA seq 334 aa
MRSIWKGSLVFGLVNVPVAVYSATEDHDIKFHQVHEKDGGRIRYQRTCEIDGEVVPFGDI
AKSYEADDGRTAIITDDDLKSLPTSSEREIDLLSFVPADQIDPVLYDASYLLEPASKSAK
AYVLLRETLAENDRVAIVHFALRQKVRLAALRVRGEVLVIQTLRWPDEMREASFKSLETP
VSLSPAEKQMAALLVDSYADDFHPEQHEDSYRAELQQMIDAKLEGEQAFPDVVESEGEDA
EVLDLLAALQRSVQRSKGAESVRSTARSADADGGSGPAKKPRAHKPAATDDPDDKPKSAG
RSRSATAKPAATKARAGKAVPAKTTKAEPRSKTA
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgcgctccatttggaagggttccctggtcttcgggctggtcaatgtgccggtggccgtc
tattcggccaccgaggaccacgacatcaagttccaccaggtgcacgagaaggacggcgga
cggatccgctatcagcgcacctgcgagatcgacggcgaggtagtgccgttcggtgatatc
gccaagtcctacgaggccgacgacggacggaccgccatcatcaccgacgacgacctcaag
agccttccgaccagttcagagcgcgagatcgacctgctgtccttcgtaccggccgaccag
atcgatccggtgctctacgacgcgagctacctcctcgagcctgcgtcgaagtccgccaag
gcctacgttctcctgagggaaaccctggcggagaacgaccgggtggcgatcgtccatttc
gcactccggcagaaggtgaggctggcggcgctgcgcgtccgcggcgaagtcctggtcatc
cagaccctgcgctggccggacgagatgcgcgaggcgtcgttcaagtccctggagacgccg
gtttcgctgtcgcccgccgagaagcagatggctgcgctgctggtcgactcctacgccgac
gatttccaccccgagcagcacgaggacagctatcgggccgaactccagcagatgatcgac
gcgaaactggagggggagcaggcgttcccggacgtcgtcgagtccgagggcgaggacgcc
gaggtgctcgacctgctggctgcgctacagcggagcgtgcagcgcagcaagggcgccgag
agcgtcaggtcgacggcccgttccgctgacgcggacggagggtcgggcccggccaagaaa
ccgagggcccacaagcctgccgctaccgacgatcccgacgacaagcccaaatccgcaggc
cgctctcgatccgcgacagcaaagcccgcggccaccaaggcccgggccggcaaggcggtg
ccggcgaagaccacgaaagcagagccccgctccaagaccgcctga

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