Nakamurella sp. PAMC28650: H7F38_19470
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Entry
H7F38_19470 CDS
T08954
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
naka
Nakamurella sp. PAMC28650
Pathway
naka00470
D-Amino acid metabolism
naka00550
Peptidoglycan biosynthesis
naka01100
Metabolic pathways
naka01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
naka00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H7F38_19470
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H7F38_19470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
H7F38_19470
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
naka01011
]
H7F38_19470
Enzymes [BR:
naka01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
H7F38_19470
Peptidoglycan biosynthesis and degradation proteins [BR:
naka01011
]
Precursor biosynthesis
Amino acid ligase
H7F38_19470
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp
CPSase_L_D2
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
QNK80351
LinkDB
All DBs
Position
complement(4291785..4292810)
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AA seq
341 aa
AA seq
DB search
MTARVLHLVGSAVSEFLCDLSRLYAKDALESTADAERYEFHVAYVTPDLQWRFPADLSPE
AIGSAPPMPLSEAVQHLTALRLDVVVPQMFCLPGMTSYRALLDVLGLPYVGNTPDVMAMT
ANKAHAKAVVAAAGVAVPPGEVLRRGGAEPSLPLPVVVKPVDGDNSLGVSLVRSREEYGA
ALKLAFAHSGGALVESFVELGREVRCGILVRDGELVALPLEEYRVDSATKPIRNHDDKIS
RNDDGDLNLVAKQLSKAWMVDLGDPITSRVWEAAKKCHVALGCRDYSLFDFRIDPSGQPW
FLEAGLYCSFAGKSVIPMMAEAAGIPLSDLFRIAVQEAIAR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcccgtgtgctgcacctggtgggttccgcggtcagcgaattcctgtgcgatctg
tcgcgtctgtatgcgaaggatgcgctggaatctacggcggacgccgaacgctacgaattc
cacgtcgcctatgtgaccccggatctgcaatggcggttcccggccgatctgagccccgaa
gcgatcggctcggcaccgccgatgccgttgagcgaggcggtgcagcacctgacggcgctc
cggctcgatgtcgtggtgccgcagatgttctgcctccccggcatgacgtcctaccgggcg
ttgctcgatgtgctcgggctgccctacgtggggaacacccccgacgtgatggcgatgacc
gcgaacaaggcgcacgcgaaagccgtcgtggccgcagcgggtgtggccgtaccgcccggc
gaggtactccgccgagggggagcggagccgtccctcccgctgccggtggttgtgaaaccg
gtcgacggcgacaactccctcggtgtgagcctggtccgcagccgggaggagtacggcgcc
gccctcaagctggcgttcgcccattccggcggggccctggtggagtcgttcgtcgaactc
ggccgcgaggttcgctgcggcatcctggtgcgtgacggtgaactcgtcgcgctgccgctg
gaggagtaccgggtcgacagtgcgaccaagccgatcaggaatcacgacgacaagatcagc
cggaacgacgacggtgacctcaacctggtcgcgaagcagttgtcgaaggcgtggatggtg
gacctgggtgatccgatcacgtcgcgggtgtgggaagcggcgaagaagtgtcacgtggcc
ctgggatgtcgcgactacagccttttcgacttccggatcgaccccagcgggcagccgtgg
ttcctggaggccggcctctactgctccttcgccgggaagagcgtcatccccatgatggcc
gaggccgccgggataccgctgtccgatctcttccggatcgccgtgcaggaggcgatcgca
cgatag
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