Nakamurella sp. PAMC28650: H7F38_21225
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Entry
H7F38_21225 CDS
T08954
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
naka
Nakamurella sp. PAMC28650
Pathway
naka03420
Nucleotide excision repair
naka03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
naka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H7F38_21225
03430 Mismatch repair
H7F38_21225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naka03400
]
H7F38_21225
Enzymes [BR:
naka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H7F38_21225
DNA repair and recombination proteins [BR:
naka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H7F38_21225
MMR (mismatch excision repair)
Other MMR factors
H7F38_21225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QNK83930
UniProt:
A0A7G8WU87
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All DBs
Position
complement(4668418..4670451)
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AA seq
677 aa
AA seq
DB search
MSVTVDLLAGLDDGQRAAVLAPSGPVCVLAGAGTGKTRTITHRIAHLVEDGSHPVSEILA
VTFTTRAAGEMRLRLRSLGVPGVQARTFHSAALKQLKYFWPKAVGGQLWPVLEHKLRLVA
IAAKRAGAGTDAATLRDLASEIEWAKASLIGPEDYLAAIAKHQRDTPVAAATVVKVFGGY
ERAKNEAEQLDFDDLLLQTCAILESDEDVAREFRARYRCFVVDEYQDVTPLQQRMLDAWL
GGRDQLTVVGDANQTIYSFAGASPSNLLDFDRRYPHATVVRLERDYRSTPQVVTLANRII
AGAQGKAARLRLKLVAVLPDGPAASFDEHPDEPAEARAVAQKAAALVAGGTPASGIAILY
RINAQSEVYEKALTDASVPYVVRGGERFFARPEVRQAIIALRQGANLDLDVPLVAAVRQL
LVPVGLTNEPPPAGALRDRWDSLLALVGVAEELADLQPDAKLAALVAELDQRAEAQHAPT
VEGVTLASLHAAKGLEWDAVFLVGLTDGTLPIQHAETPDEIEEERRLFYVGVTRARTRLA
ISWALSRTEGGRRGRKRSRFLTGLAPEPAPVGRTRAAGRCRLCGGPLSTPAELKIGRCDN
CPSTADPDLVEALRAWRRSTSTEASVPAYVVFSDATLLAIAERRPTDDAALLSIPGIGRS
KLDAYGSEVIGIVASTR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacggtggatctgctggcggggctcgacgacgggcagcgtgctgcggtactg
gctccgagtgggccggtctgcgtgctggccggagccgggacgggcaagacccggaccatc
acccatcgcatcgcccatctcgtcgaggatggttcgcacccggtcagcgagatcctcgcg
gtcaccttcaccaccagggccgccggcgagatgcgtttgcggctcaggagtctcggtgtc
ccgggtgtgcaggccaggactttccactcggcggccctcaaacagctcaagtacttctgg
cccaaggccgtgggcggccagctgtggccggtgctggagcacaaactgcgtctggtcgcg
atcgccgcgaagcgcgccggggccggtacagacgccgccacgctgcgggacctggccagc
gagatcgagtgggcgaaggcctcgctgatcggccccgaggactacctcgccgccatcgcc
aagcaccagcgcgacactccggtggccgccgccaccgtggtcaaggtgttcggcggctac
gagcgggcgaagaacgaggcagagcaactcgacttcgacgacctgctgctgcagacgtgc
gcgatcctggagagcgacgaggacgtggccagggaattccgggccaggtaccgctgcttc
gtggtggacgagtaccaggacgtcacgccgctgcagcagcggatgctggacgcctggctc
ggcggccgcgatcagctcaccgtggtcggggacgccaaccagaccatctactcgttcgca
ggggcgtcgccctccaacctgctcgacttcgaccggcgttacccgcacgccaccgtcgtc
cggctggagcgcgattaccggtcgaccccgcaggtggtcaccctggccaatcgcatcatc
gccggtgcacagggcaaggcggcccggttgcgtctgaagctggtcgccgtcctcccggac
ggtcccgcggcctccttcgacgaacatcccgacgagccggccgaggccagggccgttgcc
cagaaggccgcggcgctcgtcgcaggcggtacgccggcctccggtatcgcgatcctctac
cggatcaatgcccagtcggaggtctacgagaaggcgctcaccgatgcgtcggtgccctac
gtggtccggggcggcgagaggttcttcgcccggccggaggtccgtcaggcgatcatcgcc
ctgcggcagggagcgaacctggatctcgacgtaccgctggtcgcggcggtccgtcaactc
ctggtgccggtgggcctgacgaacgagccaccgccggccggtgccctgcgtgatcgatgg
gactccctgctcgccctggtcggggtggcggaagaactcgccgacctgcaaccggacgcg
aagctggccgcgctggtcgccgaactcgaccagcgggccgaggcccagcacgccccgacg
gtcgaaggtgtcaccctcgcctcgcttcacgcggccaagggactggagtgggatgcggtg
ttcctcgtcgggctgaccgacggcaccctgcccatccagcatgccgagacccccgacgag
atcgaggaggagcgccggctcttctacgtcggcgtgaccagggcgcggaccaggttggcc
atctcctgggctctgtcgcggaccgagggcggccggcgcggacgcaagcgcagtcgattc
ctgacggggctcgcgccggagccggcgcccgtcggccggacgagggccgccggacgttgc
cggctgtgcggcggaccgctcagcacacccgcggaactgaagatcggccgctgcgacaat
tgtccgtccaccgcggatcccgacctcgtcgaggcgctgcgggcgtggcgccggagcacc
tccaccgaggcttcggtgccggcctacgtggtgttctccgacgccaccctgttggccatc
gccgagcgtcggcccaccgatgacgctgcgctgctgagcattccgggtatcgggcgctcg
aagctcgatgcctatggttccgaagtgatcgggatcgtcgcctccacgcgatga
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