Nakamurella sp. PAMC28650: H7F38_23840
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Entry
H7F38_23840 CDS
T08954
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
naka
Nakamurella sp. PAMC28650
Pathway
naka02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
naka00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H7F38_23840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
naka02000
]
H7F38_23840
Transporters [BR:
naka02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
H7F38_23840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
New_glue
Motif
Other DBs
NCBI-ProteinID:
QNK81062
LinkDB
All DBs
Position
complement(5279060..5280286)
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AA seq
408 aa
AA seq
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MRSSTVLAVAVAASLLTVSACSSTSTASSASPGSSSAAVSAGSSSAAVSAAGAPMSGCPS
SAAADTFTFSSDGDVNVQNLWQQTLLPAFKKACPQFTVNFVFDIHSANANLNVSKIAAAD
KVGQAPPIDVADDSVAEAAAQAGLTQKITAAQVPAISEVNPAALARFDSAALPYRGSSVL
LAYDSTKVANPPKTLKDLLAWIIANPGQFTYNDPSSGGSGGSFVETVLDSYVSAADLTKM
QSGYTPALESQWAQGFTTLKGLTPSIYQKVYPNGNQAVLDLLGKGEISMAPVWSDQFLAA
KGQGQLGAEYKVTQIADPSFTGGAAYLAIIKGSKHAAAGAAFIQWLLQPQQQGEIVKSIA
GFPAISMTKLPTAEQTAFGGVDVQNLRPGVSSKMGADMQSQWAAKVPG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccagcaccgttctggccgttgccgtcgcagcatccctgttgacggtttcggcc
tgctcctcgacgtccaccgcctcatcggcctccccgggttccagctcggcggcggtgtcg
gcgggttccagctcggcggcggtgtcggcggcaggcgccccgatgtccgggtgcccgtcc
tccgcggcggcggacacgttcaccttctcctccgacggtgatgtcaacgtgcagaacctg
tggcagcagaccctgctgcccgccttcaagaaggcgtgcccccagttcaccgtcaacttc
gtcttcgacatccattcggccaacgcgaatctcaatgtctcgaagatcgccgccgcggac
aaggtcgggcaggctccgccgatcgacgtcgccgacgattcggtcgccgaggcggcggcc
caggccgggctgacccagaagatcaccgcggcgcaggtcccggccatctcggaggtgaat
ccggctgcactggcccggttcgactccgcagcgttgccctaccggggttcctcggtgctg
ctggcctacgactcgaccaaggtcgccaacccgccgaagacgttgaaggatctcctggcg
tggatcatcgccaaccccgggcagttcacctacaacgatccctccagcggcggctccggt
ggttcgttcgtcgagaccgtactggattcctacgtctccgccgcggatctgaccaagatg
cagtccggttatacgccggcactggaaagccagtgggcacagggctttacgaccctgaag
ggcctgacaccctcgatctaccagaaggtgtatcccaacggcaaccaggcggtgctggat
ctgctcggcaagggtgagatctcgatggccccggtctggtcggaccagttcctggccgcc
aagggccaggggcagttgggcgccgagtacaaggtcacgcagatcgccgatccgtcgttc
accggcggcgcggcgtacctggcgatcatcaagggcagcaagcacgccgcggccggcgcc
gccttcatccagtggctgctgcagccgcagcagcagggcgagatcgtcaagagcatcgcc
gggttcccggccatctcgatgaccaagctcccgaccgccgagcagactgccttcggcggc
gtcgacgtgcagaatctgcggccgggcgtgagttccaagatgggcgcagacatgcagtcc
cagtgggcggcgaaagtccccggatga
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