Nocardiopsis akebiae: KGD83_00885
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Entry
KGD83_00885 CDS
T08903
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
nake
Nocardiopsis akebiae
Pathway
nake03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGD83_00885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nake03019
]
KGD83_00885
Enzymes [BR:
nake01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KGD83_00885
Messenger RNA biogenesis [BR:
nake03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KGD83_00885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
QUX29192
LinkDB
All DBs
Position
197669..199168
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AA seq
499 aa
AA seq
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MPNTEFSRESDAAQQPDAGDAPGSGALTGAQRAAVTALADSFPTVSEELGERFAAHGHQL
ALVGGPVRDALLGRPANDVDLTTDAVPQRILELVDGWADSVWTVGIDFGTVGLRKKGLQL
EVTTYRSESYSPKSRKPEVAYGTDIQDDLLRRDFTVNAMAVRLPGLEFVDPFGGLSDLRD
KVLRTPGRPEDSFSDDPLRIMRAVRFAAQLGFTLAPEVAEAARDMADRLSIVSAERVRDE
LTKLMLSPDPHRGVELMVDLGIARYVLPEIPKLRLEIDEHHRHKDVYEHSLTVLDQAIEL
EEKRGHEPDLVLRLAALLHDVGKPKTRAFESGGRVTFHHHEVVGASMSRKRLTALRFPKD
VVSDVSTLVELHLRFHGYGRGEWTDSAVRRYARDAGTQLERLHILTRADCTTRNRRKAAA
LARSYDDIERRIGLLAEQEELDRIRPDLDGNEIQEILGVKPGPVVGRAYRFLLELRLENG
PMGKEAATEELRAWAAEHL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacacagagttttcgcgggagagcgacgccgcccagcagccggacgccggggac
gcaccgggttcgggtgcgctgaccggtgcgcagcgtgccgcggtcacggcgttggcggac
tccttcccgaccgtctcggaggaactcggcgagcgcttcgccgcacacggccatcagctc
gccctcgtcggcgggccggtgcgcgacgccctcctcggcaggcccgccaacgacgtggac
ctgaccacggacgcggtgccccagcgcatcctggagctcgtggacggctgggccgactcc
gtgtggaccgtcggcatcgacttcggcaccgtgggcctgcgcaagaagggcctccaactg
gaggtcaccacctaccgcagcgagtcctactcgcccaagtcccgcaagcccgaggtggcc
tacggcaccgacatccaggacgacctgctgcgccgcgacttcaccgtcaacgccatggcg
gtgcgcctgcccggcctggagttcgtcgacccgttcggcggactgtccgacctgcgggac
aaggtgctgcgcacccccggcaggcccgaggactccttcagcgacgacccgctgcgcatc
atgcgcgcggtccgcttcgccgcccagctcggcttcaccctggcgcccgaggtggccgag
gccgcccgggacatggccgaccggctctccatcgtctccgccgagcgcgtccgcgacgag
ctgaccaagctcatgctcagccccgacccgcaccgcggcgtcgaactcatggtggacctg
ggcatcgcccggtacgtgcttccggagatccccaagctgcgcctggagatcgacgagcac
caccggcacaaggacgtctacgagcactcgctcaccgtcctggaccaggccatcgagctg
gaggagaagcggggccacgagcccgacctcgtgctgcgcctggccgcgctgctgcacgac
gtcggcaagcccaagacgcgcgccttcgagtccggggggcgggtgaccttccaccaccac
gaggtggtgggcgcctcgatgagccgcaagaggctcaccgcgctgcgcttccccaaggac
gtggtgtccgacgtcagcaccctggtcgaactgcacctgaggttccacggctacggcagg
ggcgagtggaccgactccgcggtccgccggtacgcccgcgacgcagggacgcagctggag
cggctgcacatcctcacccgcgccgactgcaccacccgcaaccggcgcaaggcggcggcg
ctggcgcgctcctacgacgacatcgagcgtcggatcgggctgctcgccgagcaggaggag
ctggaccgcatccgcccggacctggacggcaacgagatccaggagatcctgggggtcaag
ccgggtcccgtggtcggccgcgcgtaccgcttcctgctggaactgcgcctggagaacggt
ccgatgggcaaggaggccgcgaccgaggagctgcgcgcctgggcggccgagcacctgtga
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