Nocardiopsis akebiae: KGD83_01055
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Entry
KGD83_01055 CDS
T08903
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nake
Nocardiopsis akebiae
Pathway
nake03030
DNA replication
nake03430
Mismatch repair
nake03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KGD83_01055
03430 Mismatch repair
KGD83_01055
03440 Homologous recombination
KGD83_01055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nake03032
]
KGD83_01055
03400 DNA repair and recombination proteins [BR:
nake03400
]
KGD83_01055
Enzymes [BR:
nake01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KGD83_01055
DNA replication proteins [BR:
nake03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KGD83_01055
DNA repair and recombination proteins [BR:
nake03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KGD83_01055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
AAA_30
AAA_16
RuvB_N
AAA_14
Rad17
AAA_18
AAA_19
DnaX_C
nSTAND3
Mg_chelatase
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QUX29222
LinkDB
All DBs
Position
234650..236830
Genome browser
AA seq
726 aa
AA seq
DB search
MSIALYRKYRPATFGEVRGQEHVTDPLRQALRSGRINHAYLFSGPRGCGKTTSARILARS
LNCAEGPTPDPCGTCDSCVALAPDGGGSIDVIEIDAASHGGVDDARDLRERAFFSPVNSR
YKIYIIDEAHMVTREGFNALLKLVEEPPPHLKFVFATTEPEKVIGTIRSRTHHYPFRLIP
PSTLKELMEDLLKEEGVSYDPAALPLVVRAGAGSARDTLSVLDQLIAGSDEGGITREGAV
SLLGYTDSSLLGEMVDALGARDGAAVFGLIDRVVEGGLDPRRFTTDLLERFRDLVVLAAV
PDALDKGLVNVDPEATERMKDQAARLGPAELSRAADILNQGLTEMRGATAPRLLLELMCS
RVLLPAADGDQGVALLARLEQMERRIASGAVAPSAAPVQPAPAPAPAPVAPASPVVPSEP
VRAAAAPAPSVAPAPPEAPATPAPAQQRSEPAGWDAPAEPAAPARSQTPAASGGPLDLGR
VQGAWPQILEAVKGRRRFTWMVLSGSDVRPVGVEGNAVLLGFSRPNEAKGFSNSGSDQVV
AAAIQQVLGMEVRVAAAGSAAAASAAPARRPEPARRTEPAGWDAPAPEAGRPAAPEPAPQ
AASGPNPGQAPEPAPAPAPAPTGPPPDRVVTGLQEPPPDPYEDAAAAPPPEYGDSSPPVE
QAPRPAAPRPETAAPPTGAASAGAVGGADASGASSASGTSGAGLIESELGGRVIDEIEHE
APDPSL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcgcgctgtaccgcaagtaccggcccgcgacgttcggcgaggtgcgtggccag
gaacacgtgacggacccgctgcgccaggcgctgcgcagcggacggatcaaccacgcctac
ctgttcagcggcccgcgcggctgcggcaagaccaccagcgcccgcatcctggcccgctcc
ctcaactgcgccgagggccccacccccgacccctgcggcacctgcgactcctgcgtggca
ctggcccccgacggcggcggcagcatcgacgtcatcgagatcgacgccgcctcccacggc
ggtgtggacgacgcccgcgacctgcgcgaacgcgccttcttctccccggtcaactcgcgc
tacaagatctacatcatcgacgaggcgcacatggtgacccgggagggcttcaacgccctc
ctcaagctggtcgaggagcccccgccgcacctgaagttcgtgttcgcgaccaccgagccc
gagaaggtcatcggcacgatccgctcgcggacccaccactacccgttccgcctgatcccg
ccgagcaccctcaaggagctcatggaggacctcctcaaggaggagggcgtctcctacgac
ccggccgcgctgccgctggtcgtacgcgcgggcgcgggttcggcgcgcgacacgctctcg
gtgctggaccagctcatcgccggttcggacgagggcggtatcacccgtgagggcgcagtc
tccctgctgggctacaccgactccagcctgctcggcgagatggtcgacgcgctcggcgcc
cgcgacggcgccgccgtgttcggcctgatcgaccgcgtggtggagggcgggctcgacccg
cgccggttcaccacggacctgctggagcgcttccgcgacctggtcgtcctggccgccgtg
cccgacgccctggacaaaggcctggtcaacgtcgacccggaggcgaccgagcggatgaag
gaccaggccgcgcgtctgggcccggccgagctgagccgcgcggccgacatcctcaaccag
ggcctgaccgagatgcgcggcgccaccgcgccccgtctgctgctggaactcatgtgctcg
cgggtgctgctcccggccgccgacggcgaccagggcgtggccctgctggcccgcctggag
cagatggaacgccggatcgcctccggtgccgtcgccccctcagccgctccggtccagccc
gcccccgcccccgcgcccgcaccggtcgcaccggcctccccggttgtgccctccgagccc
gtgcgcgccgccgcggctcccgccccgtcggtcgctccggcccctccggaggcccccgcc
accccggccccggcacagcagcgctccgagcccgcgggctgggacgccccggccgagccg
gccgcccccgcgcggagccagacgccggcggcgtccggcggtcccctggacctggggcgc
gtgcagggcgcctggccgcagatcctggaggcggtcaagggccgccgccggttcacctgg
atggtgctgagcggcagcgacgtccgtccggtgggcgtggagggcaacgccgtcctgctc
ggcttctcccggcccaacgaggccaagggcttcagcaacagcggcagcgaccaggtggtt
gccgccgcgatccagcaggtcctgggcatggaggtgcgcgtcgccgccgcgggcagcgcc
gccgcggcctccgccgcccccgcgcgcaggcccgagcccgcgcgccggaccgaacccgcc
ggatgggacgcgcccgctcccgaggccgggcggcccgcggcgcccgaaccagcgccgcag
gcggcctccggtccgaaccccggacaggccccggaacccgctccggccccggcccccgcg
ccgaccggtccgccgccggaccgcgtcgtcaccggactccaggaaccgccgcccgacccc
tacgaggacgcggccgccgcgccgccgcccgagtacggcgactcctcgcccccggtcgag
caggctccccgtcccgctgcgccgcggcccgagaccgcggcgccgcccaccggagccgcc
tccgcgggcgccgtcggcggcgcggatgcctccggggcttccagcgcctcggggacgtcg
ggcgccgggctgatcgagtccgagctcggcggccgggtcatcgacgagatcgagcacgag
gccccggacccgtccctctag
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