Nocardiopsis akebiae: KGD83_01670
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Entry
KGD83_01670 CDS
T08903
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
nake
Nocardiopsis akebiae
Pathway
nake00523
Polyketide sugar unit biosynthesis
nake01100
Metabolic pathways
nake01110
Biosynthesis of secondary metabolites
nake01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KGD83_01670 (rfbH)
Enzymes [BR:
nake01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
KGD83_01670 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
QUX29336
UniProt:
A0ABX8C4M6
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All DBs
Position
366744..368066
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AA seq
440 aa
AA seq
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MATSDEAAAVLDAVRDHHRSTRTEREFVPGVTEIWPSGAVLDEEDRVALVAAALDMRIAA
GPSARRFESAFARRLGRRKAHLTNSGSSANLLALSSLTSHLLEDQRLRPGDEVVTVAAGF
PTTVNPILQNGLVPVFVDIELRTYNTTVERVERAIGPRTRAIMIAHALGNPFEAREMARL
AEERDLFLIEDNCDAVGSLHDGRVTGSFGDLSTVSFYPAHHLTMGEGGCVLTSNLMLARV
VESMRDWGRDCWCEPGESDTCRKRFSYQLGTLPPGYDHKYTFSHVGYNLKATDLQAALGL
SQLDKLDSFGEARRRNWRRMREGLDGLPGLILPEATPNSDPSWFGFVVTVDPAAPFDRAE
LVHFLESRRIGTRLLFAGNLTRHPAYLDRPHRVSGDLENSDVATERTFWTGVYPGLTDEM
IDYVVSSVTEFVKERHKGVL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagtgacgaggcggcggcggttctcgatgcggtccgcgaccaccaccggtcc
acccgcaccgaacgcgagttcgttccgggtgtgacggagatctggccctccggggcggtc
ctggacgaggaggacagggtggccctggtcgcggccgccctcgacatgcgcatcgcggcg
ggccccagcgcacgccggttcgagtccgcgttcgcccgcaggctcggaaggcgcaaggcc
cacctgacgaactccggctcctcggccaacctgctcgcgctgtcctcgctgacctcgcac
ctgctggaggaccagcggctgcgccccggcgacgaggtcgtcacggtcgccgccgggttc
ccgacgaccgtcaacccgatcctccagaacgggctcgtacccgtgttcgtggacatcgag
ctgcgcacgtacaacaccacggtcgaaagggtggaacgggccatcggcccgcgtacccgg
gcgatcatgatcgcccacgcgctgggcaacccgttcgaggcgcgggagatggcgcgcctg
gccgaggaacgcgacctgttcctgatcgaggacaactgcgacgccgtgggctccctccac
gacgggcgggtgacgggctccttcggcgacctgtcgacggtcagcttctacccggcgcac
cacctcaccatgggcgagggcggctgcgtgctcacgtccaacctcatgctggcccgtgtg
gtggagtccatgcgcgactgggggcgggactgctggtgcgagcccggtgagagcgacacc
tgccgcaagcgcttcagctaccagctcgggacgctgccccccggctacgaccacaagtac
acgttctcccacgtgggctacaacctgaaggcgaccgacctccaggcggcgctcgggctg
agccagctcgacaagctcgactccttcggcgaggcccggcgccgcaactggcgccggatg
cgggagggcctggacggacttccgggcctgatcctgccggaggccacgcccaacagcgat
ccgagctggttcggcttcgtggtcaccgtggaccccgcggctccgttcgaccgggccgag
ctggtccacttcctggagtcccggcggatcggcacccgcctgctcttcgcgggcaacctg
acccgccaccccgcctacctggaccggccgcaccgcgtgtccggagacctggagaacagc
gacgtcgccacggagcggaccttctggaccggggtctaccccgggctcacggacgagatg
atcgactacgtggtctcctcggtcaccgagttcgtcaaggaacggcacaagggcgtcctc
tga
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