Nocardiopsis akebiae: KGD83_03345
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Entry
KGD83_03345 CDS
T08903
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nake
Nocardiopsis akebiae
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nake03400
]
KGD83_03345
Enzymes [BR:
nake01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KGD83_03345
DNA repair and recombination proteins [BR:
nake03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KGD83_03345
Prokaryotic type
KGD83_03345
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
QUX29628
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Position
768550..769851
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AA seq
433 aa
AA seq
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MAPATIVLFTQDLRVHDHPALAAAVERPGPTLPVFVLDPAVVGRSARNRAALLADALADL
RAALRERGADLVLLRGDTVREVAALARVSGADTVHVTDGVSSLAARRARRLRAAGLTVRA
FPGLTVVPPGEVTPAGGDHYKVFTPYWKAWEAAAWRDTVAPPDRVVLPDGIRSGELPGRG
SDGLGALAEDLPRGGERAARERLDAWLSSGLEAYPDRHDDLPGAATSHLSADLRLGCLSP
LEAALAASPLAGGEAFVRQLAWRDFHHQVTAAFPAVNVRDYRPRDKRWREDPDGLEAWKR
GRTGVPVVDAGMRQLLREGFMHNRARMITAAFLTRALRVHWREGADHFHAHLVDGDVANN
YGNWQWVAGTGNDTRPNRAFNPLRQARRFDPEGVYVRRYLPELAELPGRRAHTPWREEHP
PPDYPAPIADPGH
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcccgccaccatcgtcctgttcacacaggacctccgcgtccacgaccaccccgcc
ctggccgccgcggtcgagcgcccaggcccgaccctgccggtcttcgtgctggatcccgca
gtggtcggccggtccgcccgcaaccgcgccgccctgctcgccgacgccctcgccgacctg
cgggccgcgctgcgcgagcgcggcgccgacctggtcctcctgcggggcgacaccgtccgg
gaggtcgccgccctggcccgggtcagcggggccgacaccgtccacgtcaccgacggcgtc
agctccctggccgcgcggcgcgcgcgacgcctgcgcgcggccggcctgaccgtgcgcgcc
ttcccggggctcacagtggtcccgccgggggaggtgaccccggcgggcggcgaccactac
aaggtgttcacgccctactggaaggcatgggaggccgccgcgtggcgcgacacggtcgcg
ccgccggaccgcgtggtcctgcccgacggcatccggtccggcgagctgcccggacgcggg
tcggacggtctgggcgcgctcgccgaggacctgccgaggggaggggagcgcgcggcccgc
gagcgcctggacgcctggctgtcgtccgggttggaggcctaccccgaccggcacgacgac
ctgccgggcgcggccacctcgcacctgtccgccgacctgcgcctgggctgcctgtcaccg
ctggaggccgccctggccgcctcacccctggccgggggagaggcgttcgtccgccagctc
gcctggcgcgacttccaccaccaggtcaccgcggccttcccagcggtgaacgtccgcgac
taccggccccgggacaagagatggcgcgaggaccccgacggcctcgaggcctggaagcgg
gggcggaccggcgttccggtcgtggacgcaggaatgcgccagctgctgcgcgaggggttc
atgcacaaccgggcgcgcatgatcaccgcggcgttcctcacccgggccctgcgcgtgcac
tggcgagagggcgccgaccacttccacgcccacctcgtggacggggacgtggccaacaac
tacggcaactggcagtgggtcgcgggcacgggcaacgacacccggcccaacagggcgttc
aacccgctgcgccaggcgcgcagattcgaccccgaaggcgtgtacgtccgccgctacctg
cccgaactggccgagctgccgggcaggcgcgcgcacacgccctggcgggaggagcacccg
cccccggactacccggcgccgatcgccgaccccggccactga
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