Nocardiopsis akebiae: KGD83_03645
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Entry
KGD83_03645 CDS
T08903
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
nake
Nocardiopsis akebiae
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nake03400
]
KGD83_03645
DNA repair and recombination proteins [BR:
nake03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KGD83_03645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QUX29682
LinkDB
All DBs
Position
complement(857359..857742)
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AA seq
127 aa
AA seq
DB search
MRANRSRDTKPELAIRRLVHAAGLRYRVAAKPLPRMRRTADLLFRPAKVAVFVDGCFWHG
CPDHFVAPKTNPGYWEDKIADNKGRDRDTDARLEEAGWLVLRFWEHQDPAECAGAVVSAV
SARKGQL
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccaaccgcagccgcgacaccaagcccgagctcgccatccggcgcctggtgcac
gccgccgggctgcgctaccgggtcgcggccaaacccctgccgaggatgaggcgcacagcc
gacctgctcttccgccccgccaaggtggcggtgttcgtggacgggtgcttctggcacggc
tgccccgaccacttcgtcgccccgaagaccaaccccggctactgggaggacaagatcgcg
gacaacaagggccgcgaccgcgacaccgacgcaaggctggaggaggccgggtggctggtg
ctgcgcttctgggagcatcaggacccggccgagtgcgccggggccgtggtctcggccgtc
tcagcccgtaagggtcagctgtag
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