Nocardiopsis akebiae: KGD83_04895
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Entry
KGD83_04895 CDS
T08903
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
nake
Nocardiopsis akebiae
Pathway
nake02024
Quorum sensing
nake03060
Protein export
nake03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KGD83_04895 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KGD83_04895 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KGD83_04895 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nake02044
]
KGD83_04895 (secD)
Secretion system [BR:
nake02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KGD83_04895 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
Sec_GG
7TM_GPCR_Sri
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QUX29909
LinkDB
All DBs
Position
complement(1135606..1138260)
Genome browser
AA seq
884 aa
AA seq
DB search
MSSQTGAGARWTRALISLLVILVAFGAAWFIPPRLGLDLSGGTQIVLETQDGPEGTPANS
ENTDQVVEVLRQRIDRLGVSEATMSRSGENRIIVELPGVQDPAEAAQIIGQTAQLSFHPV
LGVGQAGGQGVQAPAPGDSANAPQATADEARAPSDAAAEGGDEAAEGGGEMTQEQLEELM
AQQGGMGGQQPPAGPSAENPEDVVMTLPDSDGTQLQLGETAIKGDQVASAEAALDSVNRA
QWTVNVNFRGEGADQWTALTADAACYDQGDPRRRVAIVLDGQIISAPEVNPEFACDVGMP
GNTTTITSPDFTSETANDLAVLIEGGSLPLPVTEVQRQTVGPTLGAEAIQASAVAALLGL
AFTTLYITLVYRLVGFLAALALGFYTLIAYGALVAINATLTLPGLAGFVLAIGMAIDANV
LIFERTREEHQRQAKVYEANKSAGLRDATEEEAASAESGVLTRKRRRAVPPSLEKAFVVG
SRKAWSAVIDTNITTLIAAALLFFFASGTVQGFGVTLSIGTLVSMFSALVIARVFVEWAV
RRAVVRKHPAVSGLNRIGGVRTWLVQKNPDLMGHRAKGLIVAGLIVAAAVAAPLIRDTNL
GVEFTGGRVLEYEVTSEEGVSVDEARSVISALDFPGSDTAVVQESGDGDISVRTGSISDD
DAARIADALSEQTGGVELVSDELIGPSMGDELRNRALIALGAALALQMVYLAWRFRWSFG
VSTMLSLAFNLLLVIGLFIWLGKPIDGVFLAALLSVIGFSVNDTVVVFDRVRDEWARDEK
TKFSEIANRAVLNTLPRTVNTSIGALIILGFLTFLGGSSLQDFSIAMLVGLTTGVLSTIF
VAVPLAIWLQRWDKTDPPHVVKERKAKQKVAAKAAREADDGAVV
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
ttgtccagtcaaacgggagcgggcgcgcgttggacacgcgccctcatctcccttctcgtc
atcctcgtcgcgttcggcgcggcgtggttcatcccgccgcgcctggggctggacctcagc
ggcggcacgcagatcgtcctggagacccaggacggccccgagggcacacccgccaactcc
gagaacaccgaccaggtcgtcgaggtgctgcgccagcgcatcgaccgcctgggcgtgtcc
gaggcgaccatgtcgcgctcgggcgagaaccggatcatcgtcgaactgcccggtgtgcag
gacccggcggaggccgcgcagatcatcggccagaccgcccagctgtccttccacccggtg
ctgggcgtgggtcaggccggcggccagggcgtgcaggcgcccgccccgggcgactccgcc
aacgccccgcaggccaccgcggacgaggcgcgcgccccgtccgacgccgcggccgagggc
ggtgacgaggccgccgagggcggcggcgagatgacccaggagcagctcgaagagctcatg
gcgcagcagggcggcatgggaggccagcagccccccgccggtcccagcgcggagaacccc
gaggacgtcgtgatgacgctccccgactccgacggcacccagctccagctcggcgagacc
gccatcaagggcgaccaggtggccagcgccgaggccgcgctggacagcgtcaaccgcgcg
cagtggacggtcaacgtcaacttccgcggcgagggcgccgaccagtggaccgcgctgacc
gccgacgccgcctgctacgaccagggcgacccgcgccgccgcgtggccatcgtgctggac
gggcagatcatctccgccccggaggtgaacccggagttcgcctgcgacgtgggcatgccc
ggcaacaccaccaccatcaccagccccgacttcaccagtgagaccgccaacgacctggcc
gtgctgatcgagggcggctcgctgccgctgccggtcaccgaggtccagcgccagacggtg
ggcccgaccctgggcgccgaggccatccaggccagcgccgtcgccgcgctcctgggcctg
gccttcaccacgctctacatcacgctggtctaccggctggtcggcttcctggccgccctg
gccctgggcttctacacgctcatcgcctacggcgccctggtcgccatcaacgccacactg
acactgccgggtctggcgggcttcgtgctggcgatcggtatggccatcgacgccaacgtg
ctgatcttcgaacgcacacgcgaggagcaccagcgccaggcgaaggtctacgaggccaac
aagtccgccgggctgcgggacgccaccgaggaggaggccgccagcgccgagtccggggtg
ctcacccgcaagcggcgccgggcggttccgccgagcctggagaaggcgttcgtcgtgggc
tcccgcaaggcgtggagcgcggtcatcgacaccaacatcaccacgctcatcgccgccgcc
ctgctgttcttcttcgcctcgggcaccgtgcagggcttcggcgtgaccctgagcatcggc
accctcgtctcgatgttctccgcgctggtcatcgcgcgcgtgttcgtcgagtgggcggtg
cgccgcgcggtcgtgcgcaagcacccggccgtcagcggcctgaaccgtatcggcggcgtc
cgcacctggttggtgcagaagaaccccgacctcatgggccaccgcgccaagggcctgatc
gtggcgggtctgatcgtggcggccgcggtcgccgctccgctgatccgcgacaccaacctc
ggtgtggagttcaccggcggccgcgtgctggagtacgaggtcaccagcgaagagggcgtc
tcggtcgacgaggcccgctccgtcatctccgcgctggacttccccggctcggacacggcc
gtggtccaggagtccggtgacggcgacatctcggtgcgcaccggaagcatctccgacgac
gacgcggcccggatcgcggacgccctgagcgagcagaccggcggcgtggagctggtcagc
gacgagctgatcggcccgagcatgggcgacgagctgcgcaaccgggcgctgatcgccctg
ggcgcggccctcgcgctccagatggtctacctggcctggcgcttccgctggtcgttcggc
gtgtccaccatgctgtcgctggccttcaacctgctcctggtgatcgggctgttcatctgg
ctgggcaagccgatcgacggcgtgttcctcgccgcgctcctgagcgtcatcggcttctcc
gtcaacgacacggtggtggtgttcgaccgggtgcgcgacgagtgggcccgcgacgagaag
acgaagttctccgagatcgccaaccgcgcggtgctcaacaccctgccgcgtaccgtcaac
acctcgatcggcgcgctgatcatcctgggcttcctgaccttcctcggcgggtcctcgctc
caggacttctcgatcgccatgctggtgggtctgacgacgggcgtcctctcgacgatcttc
gtggccgtcccgctggccatctggctccagaggtgggacaagaccgacccgccccacgtg
gtcaaggagcgcaaggccaagcagaaggtggccgccaaggccgcccgcgaggccgacgac
ggagccgtcgtctag
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