Nocardiopsis akebiae: KGD83_06170
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Entry
KGD83_06170 CDS
T08903
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nake
Nocardiopsis akebiae
Pathway
nake03420
Nucleotide excision repair
nake03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KGD83_06170
03430 Mismatch repair
KGD83_06170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nake03400
]
KGD83_06170
Enzymes [BR:
nake01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KGD83_06170
DNA repair and recombination proteins [BR:
nake03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KGD83_06170
MMR (mismatch excision repair)
Other MMR factors
KGD83_06170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QUX30126
LinkDB
All DBs
Position
1425039..1427165
Genome browser
AA seq
708 aa
AA seq
DB search
MDPDRVLEGLDPEQTQAARALRGPVCILAGAGTGKTRAITHRIAYAVSSGVVAEQQVLAV
TFTARAAGEMRGRLRALGAPRVQARTFHAAALRQLSFFWPQVVGGEKPTLIESKLPVVSR
AAHSVGLQPDRNGLRDLAGEIEWSKVTQVRPTDYDKAVVKAGRQPPMPAGEVARVFEAYE
DLRREHNLLDFESMLELTAGMITEYPAIAQRVREQYRYFVVDEFQDVNPLQRLLLDAWLG
DRDDLCVVGDPSQTIYSFAGATPGYLTGFGARYPHATVVQLVRDYRSTPQVVRVANHVIA
HARGTTSAQHLTLRAQRPDGPDPMYQEYDDEPAEATGVARKISVLLEGGTPASEIAVLVR
TNGQSASYEQALTDEGVPFTMRGTTRFFERPEIKQAVHTLRGARHGAAGEEAEPLVRTVR
QLLGQLGLTESAPEGRQARERWESLSALAQLAEDMAAAPRPDGAPVTMADLVDELDVRMA
TEHAPGFEGVTIASLHAAKGLEWDAVFLVGLTEGMMPIIYAETDEQVEEERRLFYVGVTR
AREHLAMSWSLARSPGGRKTRKPSRFLDGLRPASPSTASRRAERRKGGVTRCRVCSATLT
DAAERKLGRCLDCPSSYDEALLERLRDWRRACAQEQKVPAYVIFTDATLQAVAEQEPGSL
TQLAAVSGVGAVKLDRYGEAVLALVAGADPADVADGRTEDDGEEAADE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgaccgcgtcctggagggactggacccggagcagacccaggccgcacgcgcg
ctgcgcggccctgtgtgcatcctggccggtgccggaacgggcaagacccgggccatcacc
caccgcatcgcgtacgcggtctccagcggtgtggtcgccgagcagcaggtcctcgcggtc
accttcaccgcgcgcgccgccggggagatgcgcggcaggctgcgcgccctgggcgccccc
cgcgtgcaggcccgcaccttccacgcggccgccctgcgccagctctccttcttctggccc
caggtcgtgggcggggagaagcccaccctcatcgagagcaagctcccggtggtctcccgc
gccgcccactcggtgggcctccagcccgaccgcaacggcctgcgcgacctggccggtgag
atcgagtggtccaaggtcacccaggtgcgccccaccgactacgacaaggccgtggtcaag
gcgggccgccagcccccgatgcccgcgggcgaggtggcccgggtcttcgaggcctacgag
gacctgcgccgcgagcacaacctcctcgacttcgagtccatgctcgaactcaccgccggc
atgatcaccgagtacccggccatagcccagcgcgtgcgcgagcagtaccggtacttcgtc
gtcgacgagttccaggacgtcaacccgctccagcgcctgctcctggacgcctggctgggc
gaccgcgacgacctgtgcgtggtcggcgaccccagccagaccatctactccttcgccggg
gccacccccggctacctgaccgggttcggcgcccgctacccccacgccaccgtggtccag
ctggtccgcgactaccgctccaccccccaggtcgtgagggtggccaaccacgtcatcgcc
cacgcgcgcggcacgacctccgcccagcacctgaccctccgggcccagcgccccgacggc
cccgaccccatgtaccaggagtacgacgacgagcccgccgaggccaccggggtcgcccgc
aagatcagcgtcctgctggagggcggcaccccggccagcgagatcgcggtgctcgtgcgc
accaacggccagtctgcctcctacgagcaggcgctgaccgacgagggggtgccgttcacg
atgcgcgggaccacccggttcttcgaacgccccgagatcaagcaggccgtgcacaccctg
cgcggcgcccggcacggggcggcgggggaggaggccgagcccctggtgcgcaccgtccgc
cagctcctcggacagctcggcctgaccgagagcgcgcccgaggggcgccaggcccgtgaa
cgctgggagtcgctgtccgcgctggcccaactggccgaggacatggccgccgcgccgcgc
cccgacggtgcgccggtgaccatggccgacctcgtggacgagctcgacgtgcgtatggcc
accgagcacgcgcccggcttcgagggcgtcaccatcgcctccctgcacgcggccaagggc
ctggagtgggacgccgtcttcctggtcggcctcaccgagggcatgatgccgatcatctac
gccgagaccgacgagcaggtggaggaggagcgccgcctgttctacgtgggggtcacgcgg
gcccgcgagcacctggcgatgtcgtggtccctggcccgctcgcccggcggcaggaagacc
cgcaagccctcccgcttcctcgacggcctgcgtcccgcctccccgtccaccgcctcccgg
cgcgccgagcgccgcaagggcggcgtgacccgctgccgggtgtgctcggccaccctcacc
gacgcggccgagcgcaagctgggccgctgcctggactgcccctccagctacgacgaggcc
ctgctggaacggctgcgcgactggcgccgcgcgtgcgcgcaggagcagaaggtgcccgcc
tacgtgatcttcaccgacgccaccctccaggccgtcgccgagcaggagcccggcagcctc
acccagctcgcggccgtgtccggtgtcggcgcggtcaagctcgatcgctacggtgaggca
gtactggcgctggtggccggagcggacccggcggacgtcgccgacggccggaccgaggac
gacggggaggaagcggcggatgagtga
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