Nocardiopsis akebiae: KGD83_07250
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Entry
KGD83_07250 CDS
T08903
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nake
Nocardiopsis akebiae
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nake03016
]
KGD83_07250 (truB)
Enzymes [BR:
nake01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KGD83_07250 (truB)
Transfer RNA biogenesis [BR:
nake03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KGD83_07250 (truB)
Prokaryotic type
KGD83_07250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
NNH6
DKCLD
Saf-Nte_pilin
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QUX30319
UniProt:
A0ABX8C7A8
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All DBs
Position
1686772..1687659
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AA seq
295 aa
AA seq
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MAESGVVVVDKPADWTSHDVVAKARGLARTRRVGHAGTLDPMATGVLVLGIEKGTKLLGH
LTLTEKVYEATIRLGLTTNTDDAEGEPLVRADASGVGEEAVRAAAGRLTGRIEQVPPQVS
AIKVDGKRAYKSAREGKEVALKARTVTVAEFTVTEVRRVSDADGGFVDVDAAVTCSSGTY
IRSLARDMGADLGVGGHLTALRRTRVGPYDLSRARTLDELAEEFTQVPLAEAVAAAFPAR
ALSEDEEQRIRHGNRIDPDGSGSGPVGLFAPDGRVVALGENRRDHMKPLVVFEPA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggccgagagcggcgtcgtggtcgtcgacaagcccgccgactggacctcgcacgacgtg
gtcgccaaagcgcgcgggctcgcgcgcacccgcagggtcggccacgcgggcaccctggac
ccgatggccaccggggtcctggtgctgggcatcgagaagggcaccaagctcctgggccac
ctgaccctgacggagaaggtctacgaggcgacgatccgcctcggcctgacgaccaacacc
gacgacgccgagggcgagcccctcgtgcgcgcggacgcctccggggtcggcgaggaggcc
gtgcgcgccgccgccggcaggctcacggggcggatcgagcaggttcctccgcaggtcagc
gcgatcaaggtggacggcaagcgtgcctacaagtcggcgcgtgagggcaaggaggtcgcc
ctcaaggcccgcacggtcaccgtcgcggagttcacggtcaccgaggtgcgccgggtctcc
gacgccgacggggggttcgtggacgtggacgccgccgtcacctgctccagcggcacctac
atccgttcgctggcccgtgacatgggcgccgacctgggcgtgggcgggcacctgacggcg
ctgcggcgcaccagggttggcccctacgacctgtcccgggcgcgcacgctggacgagctg
gccgaggagttcacgcaggtcccgctggccgaggccgtggccgcggccttccccgcgcgc
gccctgagcgaggacgaggaacagcggatccggcacggcaaccggatcgacccggacggg
tccggaagcggcccggtcggcctcttcgccccggacggccgcgtcgtcgccctgggagag
aaccgccgcgaccacatgaagcccctggtggtcttcgaacccgcctga
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