Nocardiopsis akebiae: KGD83_08540 Help Entry KGD83_08540       CDS       T08903                                  Name (GenBank) RNA polymerase sigma factor   KO K03086   RNA polymerase primary sigma factor Organism nake  Nocardiopsis akebiae Brite KEGG Orthology (KO) [BR:nake00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     KGD83_08540  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nake03021]     KGD83_08540 Transcription machinery [BR:nake03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      KGD83_08540 SSDB OrthologParalogGFIT Motif Pfam:  Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1 TrmB HTH_20 Motif Other DBs NCBI-ProteinID:  QUX30542 UniProt:  A0ABX8C828 LinkDB All DBs Position 1996908..1998620 Genome browser AA seq 570 aa AA seqDB search MSSASSTRSKQSESLQEPVIQQLIERGRSQGFLEPEDVRRAFEEAEIPMSQAQSVLRSLA KEGVTVLVPESASSRRKAPRRKAATTKTAATRSTSTRSTKTTATSRAAKPVRAAAAQEQT ETVTAVVGSAEDAGGEAKAEKKPAAKKPAKKAAPKKPATKAAKTTAAKGPAAKTTGLKAA AKKTATKELGLAADGEFDEDEEGLDDLEHTGAELELVEDTPDPADKDLKPAKPEAVGAPT KPANEDESFVLYDDDDDAPAAQVVAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEA GLFAEEKLAEEAELLTVELRDELEWIAEDGGRAKKHLLEANLRLVVSLAKRYTGRGMLFL DLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINK LARVQRQMLQDLGREPTPEELARELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDL IEDSEAIQPGEAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGV TRERIRQIESKTMSKLRHPSRSQVLRDYLD NT seq 1713 nt NT seq  +upstreamnt  +downstreamnt gtgtcatctgccagttcgactcgctcgaagcagtccgagtcactgcaagagcccgtcatt cagcagctgatcgagcgtgggcggtcccagggcttccttgagcccgaggacgtgcgccgt gccttcgaagaggccgaaatcccgatgtcgcaggcgcagtccgtgctccgcagcctcgcg aaggagggcgtgaccgtgctcgtccccgagtcggcctcctcccggcgcaaggcgccgcgg cgcaaggcggcgaccaccaagacggcggccacgcggtccacctcgaccaggtccaccaag accaccgcgacgagcagggccgccaagcccgtgcgcgcggcggcggcccaggagcagacc gagacggtcacggccgtggtcggttccgcagaggacgccgggggcgaggccaaggcggag aagaagcccgcggccaagaagcccgccaagaaggcggcgcccaagaagcccgcgaccaag gccgccaagaccaccgcggccaagggcccggccgccaagaccaccggcctcaaggccgcc gccaagaagacggcgaccaaggagctcgggctcgcggcggacggcgagttcgacgaggac gaggagggcctggacgacctcgagcacaccggcgccgagctggagctggtcgaggacacc ccggacccggcggacaaggacctcaagcccgccaagcccgaggccgtgggcgccccgacc aaacccgccaacgaggacgagtccttcgtcctctacgacgacgatgacgacgcccccgcg gcgcaggtcgtggccgcgggcgcgacggcggacccggtcaaggactacctcaagcagatc ggcaaggtcccgctgctcaacgccgagcaggaggtcgaactcgccaagcggatcgaggcc ggcctgttcgccgaggagaagctggcggaggaggccgagctcctcaccgtcgagctgcgc gacgagctggagtggatcgccgaggacggcggccgcgccaagaagcacctgctggaggcc aacctccggctcgtggtctcgctcgccaagcgctacaccggccgcggcatgctcttcctg gacctgatccaggagggcaacctcggtctgatccgcgcggtggagaagttcgactacacc aagggcttcaagttctccacctacgccacgtggtggatccgccaggcgatcacccgggcc atggccgaccaggcgcgcaccatccgcatcccggtgcacatggtcgaggtcatcaacaag ctggcccgcgtccagcgccagatgctccaggacctgggccgggagcccaccccggaggag ctggccagggaactcgacatgaccccggagaaggtcgtcgaggtgcagaagtacggccgc gagccgatctccctgcacaccccgctgggcgaggacggcgacagcgagttcggcgacctc atcgaggactccgaggcgatccagccgggcgaggcggtcagcttcaccctgctccaggag cagctgcactcggtgctggacacgctgtccgagcgcgaggcgggcgtggtgtccatgcgt ttcggtctcaccgacggccagccgaagactttagacgagatcggcaaggtctacggggtc acccgtgagcgcatccggcagatcgagagcaagacgatgtcgaagctccgccacccgtcg cgttcgcaggtgctccgcgactacctggactag

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