Nocardiopsis akebiae: KGD83_09890
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Entry
KGD83_09890 CDS
T08903
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nake
Nocardiopsis akebiae
Pathway
nake03030
DNA replication
nake03430
Mismatch repair
nake03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KGD83_09890
03430 Mismatch repair
KGD83_09890
03440 Homologous recombination
KGD83_09890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nake03032
]
KGD83_09890
03400 DNA repair and recombination proteins [BR:
nake03400
]
KGD83_09890
Enzymes [BR:
nake01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KGD83_09890
DNA replication proteins [BR:
nake03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KGD83_09890
DNA repair and recombination proteins [BR:
nake03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KGD83_09890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
DUF7508
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
QUX30771
UniProt:
A0ABX8CCH6
LinkDB
All DBs
Position
2286635..2288425
Genome browser
AA seq
596 aa
AA seq
DB search
MVRQSSAPAGVQTSISDLGTPLAAASFVVLDLETTGTSASGSRITEVGAVRVRGGEVVGE
FATLVDPGTPIPANITLLTGITQSMVASAPPMEEVLPRLLAFLDAEPDTVLVAHNAPFDT
GFLKAACERHGTDWPGYPVVDTLRLARAVLARGETRNHRLATLAAYFGVPVAPNHRALED
ARATVGVLHGLVERLRPMGVSSVEELRAVTKPPTKAQRSRRHLAEDLPEEPGVYVFTDAR
GESLYVGKSKNLRRRVRTYFTAAESRQRIREMAGLVAGVTPIVCSSELEASVRELRIIAE
RKPPYNRRSRNPERASWVRLTADAFPRLSVVRTVGGEGAAHIGPYASPREAERAREALLQ
VFPLRQCTHTFRPLEAAVGGSGGGARVAPQVVTSGARWTGPCVVAQLGRCGAPCDGSESE
AEYAVHAEAARLAMTGDPAAVVDAHTARIGELAADLRYEEAAHLRDRLTAFLRGARRAQR
LSAIAAVAHLVASRRTAAGWETCVVRHGRLAASAVLRPGTDPAAFLASLVATAEYVPAGR
GPSPGALPGETELVLDWLADPATRLVEIDGEWTCPLRSAEAHTGMTHWAHGRASAQ
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtggttcgacagtcctcggcgcccgccggcgtccaaaccagcatcagcgacctcggtacg
ccgttggccgcggcgtccttcgtggtgctggacctggagaccaccggaaccagcgcgagc
ggctcccggatcacggaggtcggcgcggtcagggtgcgcggcggcgaggtcgtcggcgag
ttcgccaccctggtggatccaggtacccccataccggccaacatcaccctcctgacgggg
atcacccagtcgatggttgcctcggccccgccgatggaggaggtccttccccggctgctg
gccttcctggacgccgaacccgacaccgtgctggtggcacacaacgcgcccttcgacacc
ggcttcctcaaggccgcgtgcgagcgccacggcacggactggcccggctacccggtcgtg
gacacgctgcgcctggcccgcgccgtgctcgcgcgcggcgagacgcgcaaccaccggctg
gccacgctggcggcctacttcggggttccggtcgcgcccaaccaccgagccctggaggac
gcccgcgccaccgtcggggtcctgcacgggctcgtggagcgcctgcgccccatgggcgtg
tccagcgtggaggagctgcgcgcggtcaccaagccgcccaccaaggcccagcgcagcagg
cgccacctggccgaggacctgccggaggagccgggcgtgtacgtgttcaccgacgcccgc
ggggagagcctctacgtcggcaagagcaagaacctgcgccgccgggtgcggacctacttc
accgcggccgagagccgccagcgcatccgtgagatggcgggcctggtggctggcgtgacc
cccatcgtgtgctccagtgagctggaggcctccgtccgcgagctgcgcatcatcgccgaa
cgcaaaccgccctacaaccgtcgctcgcgcaatcccgagcgggcctcctgggtccggctc
accgccgacgccttcccgcgcctgtccgtggtgcgcacggtcggcggcgagggagcggcc
cacatcgggccctacgcctcgccccgcgaggccgagcgcgccagggaggcgctgctccag
gtcttcccgctgcgccagtgcacgcacaccttccggccccttgaggcggccgtcgggggg
agcggcggcggggcccgcgtcgccccgcaggtggtcacctcgggcgcgcggtggacgggc
ccgtgcgtggtggcccagctgggccgctgcggcgcgccctgcgacggcagcgagagcgag
gccgagtacgcggtgcacgccgaggcggcgcgcctggcgatgaccggggaccccgccgcc
gtggtggacgcgcacaccgcgcgcatcggcgaactcgccgccgacctgcgctacgaggag
gccgcgcacctgcgcgaccgcctcaccgcgttcctgcgcggagcccgacgggcccagcgc
ctgtcggccatcgccgcggtcgcgcacctggtcgcctcccgccgcaccgccgcgggctgg
gagacctgcgtggttcgccacggccgcctggccgccagcgccgtgctgcgcccgggcacc
gaccccgccgcgttcctggcgtccctcgtggccaccgccgagtacgtgcccgccgggcgc
gggcccagccccggcgcgctcccgggggagaccgagctggtcctggactggctcgccgac
cccgccacgcggctggtcgagatcgacggggagtggacatgcccgttgcgcagcgccgag
gcgcacaccgggatgacacactgggcccatggccgcgcttccgctcaatga
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