Nocardiopsis akebiae: KGD83_11410
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Entry
KGD83_11410 CDS
T08903
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nake
Nocardiopsis akebiae
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nake03016
]
KGD83_11410
Enzymes [BR:
nake01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KGD83_11410
Transfer RNA biogenesis [BR:
nake03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KGD83_11410
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QUX31717
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All DBs
Position
complement(2646146..2647399)
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AA seq
417 aa
AA seq
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MNSKTEPREPGNDDDAERAPLLREPREGLPEVTSDADALAGVVAALSAGSGPVAVDAERA
SGYRYGQRAYLVQLRREGAGSALIDPVACPDLSTLNDAVGEAEVVLHAAHQDLPCLAEIN
LRPRSLFDTELAGRLLGYQRVGLGFMVERLLHLRLAKEHSAVDWSQRPLPEDWLRYAALD
VEILIDLRDSLEVELEETGKLEWAREEFAAVLSAPPKEPRADPWRRTSGIHRVRNQRALA
AVRELWYERDRIAQERDISPGRVLPDAAIVEAATSMPRTTTELAKIRQFGIKLARRYLTT
WIKAVNRARDMPQAELPRPNAPGDGPPPVNRWGDRAPEAARRLEAARATVTGIAEDVVMP
TENLLLPDTVRRLAWAPPRAVDPDAVGAFLRERGAREWQVALTAEPLATALRTADQA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgaactccaagacagaaccccgcgaaccaggcaacgacgacgacgccgagagggccccc
cttctccgggaacctcgcgagggcctgcccgaggtcacctccgacgccgacgcgctggcc
ggtgtggtcgccgcgctctccgccgggagcggccccgtcgcggtggacgccgaacgcgcc
tccggctaccggtacgggcagcgcgcctacctggtccagctgcgccgcgagggagcgggg
tcggcgctgatcgaccccgtcgcctgccccgacctgagcacgctcaacgacgccgtgggc
gaggccgaggtggtgctgcacgccgcgcaccaggacctgccctgcctggccgagatcaac
ctgcgcccccggagcctgttcgacaccgaactggccgggcggctgctgggctaccagcgg
gtcggcctggggttcatggtggagcggctgctccacctgcggctggccaaggagcactcg
gccgtggactggtcccagcgcccgctgccggaggactggctgcgctacgcggcgctggac
gtggagatcctcatcgacctgcgggactccctggaggtcgagctggaggagaccggcaag
ctggagtgggcgcgcgaggagttcgccgcggtcctgtccgcgccgcccaaggaaccgcgc
gccgacccctggcggcgcacctcgggcatccaccgggtgcgcaaccagcgcgccctggcc
gccgtgcgcgagctctggtacgagcgcgaccgcatcgcccaggagcgggacatctcgccc
ggccgggtgctgccggacgcggcgatcgtggaggcggccacctccatgccgcgcaccacc
accgaactggccaagatccggcagttcggcatcaagctggcacggcgctacctgaccacg
tggatcaaggcggtcaaccgggcgcgcgacatgccgcaggcggagctgccccggcccaac
gcgcctggcgacggcccgccgccggtgaaccggtggggcgaccgggcgccggaggcggcg
cggcggctggaggcggcccgggccacggtcacggggatcgccgaggacgtcgtcatgccg
accgagaacctgctgctgccggacacggtgcgccgtctggcgtgggcgccgccgagggcg
gtggaccccgacgcggtgggcgcgttcctgcgtgagcgcggagcccgtgagtggcaggtc
gccctgaccgcggaacccctggccacagcgttgcggacggccgatcaggcgtag
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