KEGG   Nocardiopsis akebiae: KGD83_14635
Entry
KGD83_14635       CDS       T08903                                 
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
nake  Nocardiopsis akebiae
SSDB
Motif
Pfam: AAA_12 RNase_H_2 AAA_11 AAA_30 AAA_19 Viral_helicase1 NPHP3_N SLFN-g3_helicase AAA_25 AAA_16 UvrD_C_2 nSTAND3 NAT10_TcmA_helicase DUF2779 AAA_22 PIF1 ResIII IstB_IS21 NACHT MeaB LpxK AAA MobB RNA_helicase CbiA
Other DBs
NCBI-ProteinID: QUX26644
UniProt: A0ABX8BWQ6
LinkDB
Position
complement(3409376..3412972)
AA seq 1198 aa
MFRTTTGWVVSPTDLVDTLECDHRSALKTALAARVEGAPAPADIDPLVAQHGLAHEQAEL
ERLSALVEVARMPDPHPDDASLAAAAQATADAMAAGVPVIYQGSFHHRLTEPDPDGRTVS
FHGRADFLIRSDLDPATGRTRTPAPEDWTYEPWDTKLARRPGPGAVVQLAAYAHAVSVAT
GRTPQHMHLLTGDNHTHTLPTADFTPILSTVTTRLLTLLASEPALPAPTWGQPRPACEGC
GYQAWCSQGRTAARHLSLVAGLRTDQAAKLTDSGLDTIDALARADDDQRPATLPRRSFDQ
LRAQAALQVRQDRTRTPDNPQGTVTAEVFAPDGLASLPAPSPGDVFFDMEGYPYHSREGE
RGLEYLFGATTEDAHGAETFHAFWAHDRAQEKKALEDFVDFATARVDSDPGAHVYHYASY
EVDRLKHLSSEFATREEEVNRLLRENRLVDLYTVVRKSLRVSQRSYSIKYLEPLYLPAAR
SGGVTTATSSIDAYAAYLAAAEADDHDRAARILADIAAYNRDDCHSTARLRDWLEDHRTH
QGITDRPLVQLELTEAEAERARKRQEKAARHAALTEPLLDQVPDQAQDREPDHHTRAQLA
ALVGYYQRENLPPWREHYRRTSAPLTDLESDTDCAVPWQVRAGEWIEPAGRQRKSRRELS
LRLDTAHPHPFTSGQDVHLLYPGAPGQPATTTQAKVAEADADTLAVTETCDPDSTYSRPP
VAVLPGSPVNPAPKDGALETVARTALDTLPQWPHHPGLDVLRRIPPRLNTPGPLPDPADH
DGDLINATIAAVDRLEGSYLAVQGPPGAGKTYLAAQLITHLARQGKSVGVCSTGHKAVEN
VMTAALRAAEAAGVEVAAAKRAKGRGKDTDRDLPWEQPSSPQALASWRDKHTAQGHPVLI
GGTAWAMSNAAMLADPLDVLIIDEAGQFALADTLAVSAAARNLVLLGDPQQLPQVVQGTH
GEGADASALQHLMAGRQIIDPSRGYFLDQTRRMHPDVCATVSALSYQGRLHAHPSTADRA
LAALAPGVYTLPTPHQGRTTHSPEEVQAVVEVATHLVTDKVTDSAEAHPRPLTGHDILVV
APYNLQVRALRRALAQAARTRPALEGVRVGTVDKFQGQEATAVICSMTTSNAAEASRGTA
FVLDRNRLNVALSRAQLVAAVVFSPDLLTTAPRSIDELRLLSSFTRLTEGARPWPAAR
NT seq 3597 nt   +upstreamnt  +downstreamnt
gtgttccgcaccaccaccggctgggtcgtctcacccaccgacctcgtcgacaccctggag
tgcgaccaccgcagcgccctgaagaccgccctggccgcccgcgtcgaaggcgcacccgca
cccgccgacatcgacccgctcgtggcccagcacggcctggcccacgaacaggccgaactc
gaacgcctcagcgccctggtcgaggtcgcccgcatgcccgacccccaccccgatgacgcc
tccctggccgcggccgcccaggccaccgccgacgccatggccgccggagtccccgtcatc
taccagggcagcttccaccaccgcctcaccgaacccgaccccgacgggcgcacggtgtcc
ttccacggccgcgccgacttcctcatccgctccgacctggaccccgccaccggccgcacc
cgcacccccgcccccgaagactggacctacgaaccctgggacaccaaactcgcccgccgc
cccggccccggcgccgtcgtccagctcgccgcctacgcccacgccgtcagcgtcgccacc
ggtcgcaccccccagcacatgcacctgctcaccggcgacaaccacacccacaccctgccc
accgccgacttcacccccatcctgagcaccgtcaccacccggctgctcaccctccttgcc
agcgaacccgccctgcccgcccccacctggggccagccccgccccgcctgcgagggctgc
ggctaccaggcctggtgctcccaagggcgcaccgccgcccgccacctgtccctggtcgcc
ggactgcgcaccgaccaggccgccaaactcaccgactccggcctggacaccatcgacgcc
ctcgcccgggccgacgacgaccagcgccccgccaccctgccccgccgctccttcgaccaa
ctgcgcgcccaggccgccctccaggtccgccaggaccgcacacgcacccccgacaacccc
cagggcaccgtcaccgccgaggtcttcgcccccgacggcctggccagcctgcccgccccc
agccccggcgacgtcttcttcgacatggagggctacccctaccactcccgcgagggcgaa
cgcggcctggagtacctcttcggcgccaccaccgaggacgcccacggcgccgagaccttc
cacgccttctgggcccacgaccgcgcccaggagaagaaggccctggaggacttcgtcgac
ttcgccaccgcccgcgtggactccgaccccggcgcccacgtctaccactacgcctcctac
gaggtggaccgcctcaaacacctgagctcggagttcgccacccgcgaggaggaggtcaac
aggctcctacgagagaaccgcctggtggacctgtacaccgtcgtgcgcaagagcctgcgc
gtgtcccagcgctcctactccatcaagtacctcgaacccctctacctgcccgccgcccgc
tccggcggcgtcaccaccgccacctccagcatcgacgcctacgccgcctacctggccgcc
gccgaggccgacgaccacgaccgggcagcacggatcctggccgacatcgccgcctacaac
cgcgacgactgccactccaccgcgcgcctgcgcgactggctggaggaccaccgcacccac
cagggcatcaccgaccgccccctggtccagctcgaactcaccgaggccgaggccgaacgc
gcccgcaaacgccaggagaaggccgcccgccacgccgccctcaccgaacccctgctcgac
caggttcccgaccaggcccaggaccgcgaacccgaccaccacacccgcgcccaactggcc
gccctggtcggctactaccagcgcgagaacctgcccccctggcgcgagcactaccgccgc
accagcgcccccctgaccgacctggagtccgacaccgactgcgccgtgccctggcaggtg
cgcgcgggggagtggatcgaacccgccggccgccagcgcaagtcccgccgcgaactctcc
ctgcgcctggacaccgcccacccccaccccttcacctccggccaggacgtgcacctgctc
taccccggcgcccccggccagcccgccaccaccacccaggccaaggtcgccgaggccgac
gccgacaccctggccgtcaccgagacctgcgaccccgactccacctactcccggcccccc
gtcgccgtcctgcccggctccccggtcaaccccgcccccaaggacggcgccctggaaacg
gtggcccgcaccgccctggacaccctgccccagtggccccaccaccccggcctggacgtg
ctgcgccgcatcccgccgcgcctgaacacgcccggcccgctgcccgaccccgccgaccac
gacggcgacctcatcaacgccaccatcgccgccgtggaccgcctggagggctcctacctc
gccgtgcagggccctcccggcgcgggcaagacctacctggccgcccagctcatcacccac
ctggcccgccagggcaagagcgtgggcgtgtgctccaccggccacaaggccgtggagaac
gtcatgaccgccgccctgcgcgccgccgaggccgccggggtggaggtggccgccgccaaa
cgcgccaagggacgcggcaaggacaccgaccgggacctgccctgggaacagccctccagc
ccccaggccctggccagctggcgcgacaagcacaccgcccagggccaccccgtcctcatc
ggcggcaccgcctgggccatgtccaacgccgccatgctcgccgaccccctggacgtgctc
atcatcgacgaggccggacagttcgccctggccgacaccctcgccgtctccgccgccgcc
cgcaacctcgtcctgctgggcgacccccaacagctgccccaggtcgtccagggcacccac
ggcgaaggcgccgacgcctccgccctgcagcacctcatggccggacgccagatcatcgac
ccctcacgcggctacttcctcgaccagacccgccgcatgcacccggacgtgtgcgccacc
gtctccgccctgtcctaccagggccgcctccacgcccaccccagcaccgccgaccgggcc
ctggccgccctggcgccgggcgtgtacaccctgcccaccccccaccagggccgcaccacc
cacagccccgaggaggtccaggcggtggtggaggtggccacccacctggtcaccgacaag
gtcaccgactccgccgaggcgcacccgcgccccctgaccggccacgacatcctcgtggtg
gccccctacaacctccaggtgcgcgccctgcgccgcgccctggcccaggccgcccgtacc
cgccccgccctggagggcgtgcgcgtgggcaccgtcgacaagttccagggccaggaggcc
accgccgtcatctgctcgatgaccacctccaacgccgccgaggccagccgcggcaccgcc
ttcgtcctggaccgcaaccggctcaacgtggccctgtcgcgggcccagctggtcgcggcg
gtggtcttctcacccgacctgctcaccaccgccccccgcagcatcgacgaactgcgcctg
ctctcctccttcacccgcctgaccgagggcgcccgcccctggcccgccgcgcgctga

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