Nocardiopsis akebiae: KGD83_16005
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Entry
KGD83_16005 CDS
T08903
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
nake
Nocardiopsis akebiae
Pathway
nake02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KGD83_16005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nake02000
]
KGD83_16005
Transporters [BR:
nake02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
KGD83_16005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QUX26874
LinkDB
All DBs
Position
3688399..3689445
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AA seq
348 aa
AA seq
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MTLTRGRGVLSAAAIASVLALTACGNADLPQTAATGDGGTVITYNSPAEWGNYGEVLAAF
TERTGIQAPNDPKNSGQALAALQAEKGAPVADVAYTGIAFAGQLVEAGVLQSYVPEGAEE
VPEDLRDPDGNWTAVHTGTIAFIVNEDHLDGAPVPSSWEDLLDPAYEGKVGYLDPTQAAV
GYSAATAVNHALGGDLSDWQPGLDYLDELKENGASTSAQTATAKVAQGEIPILIDTDFNG
YKLRDEGADVSVVIPEEGSLQIPYIVGLVEGAPNAENGRELLDFYFSERGQGLFADGYMR
PVVGQMPEELADQVLPESDYERAITIDYLEQGERQQEFIDLYQSEVGF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcacccgcggacgcggcgtcctcagcgccgccgcgatcgcctccgtcctcgcc
ctgaccgcctgcggcaacgccgacctgccccagaccgcggccaccggcgacggcggcacc
gtcatcacctacaactcccccgccgagtggggcaactacggcgaggtcctggccgccttc
accgagcggaccgggatccaggcccccaacgacccgaagaactccggccaggccctggcc
gcgctccaggccgagaagggcgcgcccgtcgccgacgtcgcctacaccggcatcgccttc
gccggacagctcgtggaggccggggtcctgcagtcctacgtacccgagggcgcggaggag
gtccccgaggacctgcgcgaccccgacgggaactggaccgccgtccacaccggcaccatc
gccttcatcgtcaacgaggaccacctggacggcgcgcccgtgcccagcagctgggaggac
ctcctcgaccccgcctacgagggcaaggtcggctacctcgaccccacccaggcggccgtg
ggctactccgccgcgacggcggtcaaccacgcgctcggcggcgacctgtccgactggcag
cccggcctggactacctggacgaactgaaggagaacggcgcctccacctcggcgcagacc
gccaccgccaaggtcgcacaaggtgagatccccatcctcatcgacaccgacttcaacggc
tacaagctccgcgacgagggagccgacgtcagcgtggtcatccccgaggagggctcgctg
cagatcccctacatcgtcggcctggtcgagggcgcccccaacgccgagaacggcagggaa
ctgctggacttctacttctccgagcggggccagggcctcttcgcggacggctacatgcgc
ccggtggtcggccaaatgcccgaggagctcgccgaccaggtcctgcccgagtccgactac
gagcgcgcgatcaccatcgactacctagaacagggcgagcggcagcaggagttcatcgac
ctgtaccagagcgaggtcggcttctag
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