Nocardiopsis akebiae: KGD83_17190
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Entry
KGD83_17190 CDS
T08903
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nake
Nocardiopsis akebiae
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nake03021
]
KGD83_17190
Transcription machinery [BR:
nake03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KGD83_17190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DnaD_N
KORA
GerE
MarR
HTH_24
Sigma70_ECF
HTH_23
HTH_Crp_2
DUF7343
MarR_2
DUF134
NirdL-like_HTH
HTH_16
HTH_3
MTR4_beta-barrel
HTH_AraC
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QUX27077
LinkDB
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Position
complement(4023194..4024057)
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AA seq
287 aa
AA seq
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MSTTLNQDTVSQTDTDHTTLLPRRRTSSPGEEIPVEELLAELQGLDGHDPRAVRLREQVV
VRYQPLVNKLARRYNGRGEPLEDLKQTAMVGLVKAIHGYRPDRGKPFISYLMPTVTGEIK
RHFRDHTWAIRVPRRHQENRIKLRQVLNTFQQTHARVPTNAEIAKEMGLDEEEVVELVQA
SESYRSLSLDAPDSSDSDGQEGSRLEDHLGSEDEGLERVVQRESLKPALARLPEREREIL
KLRFFGDHTQTEIADRMGYSQMHVSRLLKNTLQQLREDVGERGPARG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaccacgctgaaccaggacaccgtgtcgcagaccgacaccgaccacacgaccctc
ctcccgaggaggcgcacgtcctccccgggggaggaaatcccggtcgaggaactcctcgcc
gaactccagggcctggacggccacgacccgcgcgcggtcagactgcgcgagcaggtcgtc
gtccgctaccagccgctggtcaacaagctcgcccgccgctacaacggccggggcgaaccg
ctggaggacctcaagcagaccgccatggtcggtctggtcaaggccatccacggctaccgg
cccgaccgcggcaagcccttcatctcctacctgatgcctacggtcaccggtgagatcaag
cggcacttccgcgaccacacctgggcgatccgcgtccccaggcgccaccaggagaaccgg
atcaagctgcgccaggtgctcaacaccttccagcagacccacgcgcgcgtccccaccaac
gccgagatcgccaaggagatggggctggacgaggaggaggtcgtcgaactcgtccaggcc
tcggagtcctaccgctccctctcgctggacgcccccgactcctccgactccgacggccag
gagggatcccgcctggaggaccacctgggcagcgaggacgagggcctggagcgggtcgtg
cagcgcgagtcgctcaagcccgccctggcccgcctgcccgagcgcgagcgcgagatcctc
aagctgcgcttcttcggcgaccacacccagaccgagatcgccgaccgcatgggctactcc
cagatgcacgtctcccggctgctgaagaacaccctgcagcagctgcgcgaggacgtgggc
gagcgcggacccgcccggggctga
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