Nocardiopsis akebiae: KGD83_21010
Help
Entry
KGD83_21010 CDS
T08903
Name
(GenBank) cellulose binding domain-containing protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nake
Nocardiopsis akebiae
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KGD83_21010
Enzymes [BR:
nake01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
KGD83_21010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
CBM_2
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
QUX27750
LinkDB
All DBs
Position
complement(4908304..4910544)
Genome browser
AA seq
746 aa
AA seq
DB search
MPPDPPAARHRARRGACLATALATGAALAAVTTGPASAAVGCEVDYTIRNQWNDGFTAAV
SVTNLGDPVDGWTLEWDFTAGERVTSGWNGEFSGSGERVSVADTGWNAAVATGASVGFGF
NGSHGGTPEIPESFTLNGTVCAGDTGEPPGEEPPDGEDPPTTGEGRQVEELGRGLVSVHG
SQGNLVSWRLLATDPEDVAFNVYRGSTRLNSRPLTGTTSYLDGGASADADYTVRPVIGGQ
EAEASGTSLALRDGYLDVPLDVPSGGSAHTYDANDASVGDLDGDGEYEIVLKWEPTNARD
NSQSGRTGPVLLDAYELSGERLWRIDLGRNIRAGAHYTQFQVYDFDGDGRSEVAVKTADG
AVDGTGGVIGDAGADHRNGDGYVLDGPEFLTMFDGRSGAELDSVDYVPGRGDVCAWGDCY
GNRVDRFLAGVAYLDGQRPSLIMARGYYTRSVIAAWDWRDGRFTRRWTFDSDEAGSRWAG
QGNHQLSIADADGDGRDEVVYGSMAVDDDGSGMWATGHGHGDAMHVGDLLPDRSGLEVFT
ITERTGGAAGAYVADADSGDVVWRRPTASGEEGPGRGVAADVWPGNPGAEFWVTGGGISG
MYDAEGNRLGVRAPSSANFVAWWDGDPLRELLDGTRVDEYGTGGDTRLLTGSGVASNNGT
KSTPALSGDILGDWREEVVWRTEDNRALRIYSTPLPTELRMPTLMHDTQYRVAVAWQNTA
YNQPPHPGFFIGDGMEPAPWPEVYTP
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgccccccgacccccctgccgcccgtcatcgcgcacggcgcggcgcctgcctcgccacc
gccctcgccacgggcgcggcgctcgccgccgtgacgaccggccccgcctccgccgccgtc
ggctgcgaggtcgactacacgatccggaaccagtggaacgacgggttcaccgccgccgtg
tccgtcaccaacctcggtgatcccgtcgacggctggaccctggagtgggacttcaccgcg
ggcgagcgcgtcaccagcggctggaacggcgagttctccggttccggggagcgcgtcagt
gtggccgacaccgggtggaacgccgccgtcgccaccggggcctcggtcggcttcggcttc
aacggctcccacggcggcacccccgaaatccccgagtccttcacgctcaacggcaccgtc
tgcgccggcgacaccggggaaccgcccggagaggagccgcccgacggcgaggacccgccc
accaccggagaggggcgccaggtcgaggaactgggccgcggcctggtgagcgtgcacggc
tcgcagggcaacctggtgagctggcggctgctggccaccgaccccgaggacgtcgcattc
aacgtctaccggggctccacgcgcctcaactcccggcccctcaccggaaccacctcctac
ctggacggcggagcctccgccgacgccgactacacggtccgccccgtgatcggcggccag
gaggcggaggcgtcggggacctcgctggcgctgcgcgacggctacctggacgtgcccctg
gacgtcccgtccggcggcagcgcccacacctacgacgccaacgacgccagcgtgggcgac
ctcgacggcgacggcgagtacgagatcgtcctgaagtgggagcccaccaacgccagggac
aactcccagtcgggacgcaccggccccgtgctgctcgacgcctacgaactcagcggcgag
cggctgtggcggatcgacctggggcgcaacatccgggcgggtgcgcactacacccagttc
caggtctacgacttcgacggcgacggtcggtccgaggtggccgtcaagacggcggacggc
gccgtggacggcaccggcggggtcatcggcgacgccggtgccgaccaccgcaacggcgac
ggctacgtcctggacgggccggagttcctcaccatgttcgacggccgcagcggggccgaa
ctggactcggtggactacgtgcccggacgcggtgacgtctgcgcctggggcgactgctac
ggcaaccgggtggaccggttcctggcgggcgtcgcctacctggacggccagcggcccagc
ctgatcatggcgcgcggctactacacgcgctcggtcatcgcggcctgggactggcgcgac
gggcgcttcacccggcgctggaccttcgacagcgacgaggccggatcgcggtgggccggg
cagggcaaccaccagttgagcatcgccgacgccgacggtgacggccgcgacgaggtcgtg
tacgggtcgatggccgtggacgacgacggaagcgggatgtgggccaccggccacggccac
ggggacgccatgcacgtgggcgacctgctgcccgaccgctccggcctggaggtcttcacc
atcaccgagcgcacgggaggcgcggcgggcgcctacgtggccgacgccgacagcggggac
gtggtctggcgcaggccgaccgccagcggtgaggaggggcccggccggggcgtggccgcg
gacgtgtggccgggcaacccgggagcggagttctgggtcacgggcggcggcatcagcggc
atgtacgacgccgaggggaaccgcctgggcgttcgcgccccctcgtccgcgaacttcgtg
gcctggtgggacggcgacccgctgcgggaactgctggacggcacccgtgtcgacgagtac
gggaccgggggcgacacccggctgctgaccggctccggggtggcctccaacaacggcacc
aagtccacaccggcgctgagcggggacatcctcggtgactggcgcgaggaggtcgtctgg
cgcaccgaggacaaccgggcgctgcggatctactccacgccgctgcccaccgagctgcgg
atgccgacgctgatgcacgacacccagtaccgggtggccgtggcctggcagaacaccgcc
tacaaccagccgccgcacccgggcttcttcatcggggacggcatggagcccgctccctgg
ccggaggtgtacacgccctga
DBGET
integrated database retrieval system
