Nocardiopsis akebiae: KGD83_22800
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Entry
KGD83_22800 CDS
T08903
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nake
Nocardiopsis akebiae
Pathway
nake03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KGD83_22800 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nake03019
]
KGD83_22800 (orn)
03009 Ribosome biogenesis [BR:
nake03009
]
KGD83_22800 (orn)
Messenger RNA biogenesis [BR:
nake03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KGD83_22800 (orn)
Ribosome biogenesis [BR:
nake03009
]
Eukaryotic type
Pre-60S particles
RNases
KGD83_22800 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QUX28070
UniProt:
A0ABX8C0Z9
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All DBs
Position
5335546..5336196
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AA seq
216 aa
AA seq
DB search
MNDSLVWIDCEMTGLDFERDALIEVACLITDGELNILDEGVDVVIRPPQDALDRMGDFVR
NMHTTSGLLEELDKGVSLQEAEDLVLEHIRQYVTEPRKAPLCGNSIATDRTFLARDMKRI
DEFLHYRMVDVSSIKELLRRWYPRVYYASPEKNGGHRALADITESIHELRYYRAAAFVPE
PGPNSATARAIAADVVAGGTGAEAREAALGNDAAEN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacagtttggtgtggattgactgcgagatgacgggcctggacttcgagcgcgac
gcgctgatcgaggtggcctgcctgatcaccgacggcgagctcaacatcctcgacgagggc
gtggacgtcgtgatcagaccgccgcaggacgcactggaccgtatgggggacttcgtccgc
aatatgcacacgacctccggcctgctggaggagctggacaagggcgtgagcctccaggag
gccgaggacctcgtcctggagcacatccgccagtacgtgaccgagccgcgcaaggctccg
ctgtgcggcaactcgatcgccacggaccgcaccttcctggcccgcgacatgaagcgcatc
gacgagttcctgcactaccggatggtcgacgtttcctcgatcaaggaactgctgcgccgc
tggtacccgcgcgtgtactacgcgagcccggagaagaacggcgggcaccgggcgctcgcc
gacatcaccgagagcatccacgagctgcgctactaccgcgccgcggccttcgtgcccgag
cccggcccgaactcggccaccgcccgcgccatcgccgccgacgtggtggccggtggcacc
ggcgcggaggcgcgcgaggcggctctcgggaacgacgcggcggaaaactga
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