Nocardiopsis akebiae: KGD83_23120
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Entry
KGD83_23120 CDS
T08903
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nake
Nocardiopsis akebiae
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nake03021
]
KGD83_23120
Transcription machinery [BR:
nake03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KGD83_23120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_IclR
DUF7343
HTH_3
HTH_23
HTH_31
MarR_2
HTH_37
Sigma70_ECF
HTH_Crp_2
MarR
HTH_24
KORA
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
QUX28126
UniProt:
A0ABX8C149
LinkDB
All DBs
Position
complement(5415292..5416149)
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AA seq
285 aa
AA seq
DB search
MSENSAQTSRTAADHTTVIPRPRRPMPAEDATAEELLSVLGGLGEGDPRANGLRERVMVL
YQPLINKIARRYGGRGEPLDDLKQTAMVGLAKAVRGYDPDRGKPFVSYLLPTVTGEIKRH
FRDHTWAVRVPRRHQENRVRLRRVTGEFQQEHARTPTIAELAHEMGLPEAEVSELAQVSE
SYRSLSLDAPDSSDAEGQEGTRLEDHLGCEDTALDRVVERESLRPALARLPAREREILRL
RFFGDHTQSEIADRLGYSQMHVSRLLSGVLEQLREEVGGHAPGRS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgagaacagcgcgcaaacgtcccgaaccgccgcagaccacacgaccgtcatcccc
aggccccgcaggccgatgcccgccgaggacgccacggcggaggagctgctgtccgtactc
ggagggctgggggagggcgacccgcgggccaatggactgcgtgagcgggtcatggtcctc
taccagcccctgatcaacaagatcgcgcgccgctacggggggcgcggcgagccgctggat
gacctgaagcagaccgcgatggtgggtctggccaaggccgtgcgcggctacgacccggac
cgcggcaagcccttcgtctcctacctgctgcccacggtgacgggggagatcaagcggcac
ttccgtgaccacacctgggcggtgcgggtgccgcgccgccaccaggagaaccgggtgagg
ctgcgccgggtgacgggggagttccagcaggagcacgcgcgcacgcccacgatcgcggag
ctggcccacgagatggggctgcccgaggccgaggtcagcgagctggcgcaggtctcggag
tcctaccggtcgctgtcgctggacgcgcccgactcctccgacgccgagggccaggagggc
acgcgcctggaggaccacctgggctgtgaggacacggcattggaccgggtggtggagcgc
gagtcgctcaggcccgcgctggcgcggctgcccgcgcgggagcgggagatcctgcggttg
cggttcttcggggaccacacccagtccgagatcgcggaccggttgggctactcgcagatg
cacgtgtcgcggctgctgtcgggggtgctggaacagctgcgagaggaggtcggcgggcac
gcgcccggccgctcctga
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