Nocardiopsis akebiae: KGD83_23340
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Entry
KGD83_23340 CDS
T08903
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nake
Nocardiopsis akebiae
Pathway
nake02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KGD83_23340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nake02000
]
KGD83_23340
Transporters [BR:
nake02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
KGD83_23340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Fic-like_C
Motif
Other DBs
NCBI-ProteinID:
QUX28165
LinkDB
All DBs
Position
complement(5481045..5482850)
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AA seq
601 aa
AA seq
DB search
MTPPTPHPLMRDLSRRRLLRTIGFGAAGVAGAGVLSSCAGGDNAEGGATQFTGVFDFDLA
AQTRNVAVEDGALLMNSVYADLFLPAGAFYNWETHEWDYLLLENSAWEGDDLVVTLRPGL
KWSDGTDLTAEDLHQNYAIRILEAPAWSVGFPQITELERLDDLSVRARFDNPFPGIELQV
VKHRIFSKSTYGDFGERAIAMVADGVRQGDDEHTEFNAEFIEFNPEEIITSGPYTFDRAQ
MSDARITLVRESTGYQGEEVNFEEVVVHKGDNRQASLLIQQGEVDYSTLATSAADQQAFR
GVEGFRWIEHPGYDGCGLMFNYAAKPELKDMRVRKALKHLLDGDQIGQVARGEAYDGVRY
YSGLVDLQTEQIFTPEELAEFAAYDHDPDRATELLEEAGWTKENGVWHTAEGREASYEII
GVAGWGDFELTATQVEEAWNAFGIKTTARNVPADNPWGIWAAGDFEVAVRHWGNPEIPQY
WGAFQMNFLVENARTGETPGQDFDLKVDSPSQGEVDLEALVEAAKTAQTEEEQTEALKTM
AIVFNELLPRIPIWTYKYLAPALEGARVESFPEDHPAAQNQIYRDNHIILSLMQGGLETA
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacccctcccaccccccaccccctgatgcgggacctgagccgcaggcgcctgctccgg
acgatcggcttcggcgcggcgggcgtcgccggcgccggcgtgctgtcctcctgcgcgggc
ggcgacaacgccgagggcggcgccacgcagttcacgggcgtcttcgacttcgacctggcg
gcccagacgcgcaacgtggccgtggaggacggcgcgctgctgatgaactccgtgtacgcc
gacctcttcctgcccgcgggcgcgttctacaactgggagacccacgagtgggactacctg
ctcctggagaacagcgcctgggagggcgacgacctcgtcgtcaccctgcgcccgggcctg
aagtggagcgacggcaccgacctgaccgccgaggacctgcaccagaactacgccatccgg
atcctggaggcgcccgcctggtcggtgggcttcccgcagatcaccgaactggagcgtctg
gacgacctcagcgtccgggcgcgcttcgacaaccccttccccggcatcgagctccaggtc
gtcaagcaccggatcttctccaagtcgacctacggcgacttcggggagcgcgcgatcgcg
atggtggccgacggagtgcgccagggcgacgacgagcacaccgagttcaacgccgagttc
atcgagttcaaccccgaggagatcatcaccagcggcccctacaccttcgaccgggcgcag
atgtccgacgcgcggatcaccctggtgcgcgagagcaccggctaccagggcgaggaggtg
aacttcgaggaggtggtcgtccacaagggcgacaaccgccaggcctccctgctcatccag
cagggcgaggtcgactactcgaccctggctacctccgccgcggaccagcaggcgttccgc
ggtgtcgaggggttccggtggatcgagcaccccggctacgacggctgcgggctgatgttc
aactacgcggccaagcccgagctcaaggacatgcgggtgcgcaaggcgctcaagcacctg
ctcgacggcgaccagatcggccaggtggcgcggggcgaggcctacgacggggtgcggtac
tactccggcctggtcgacctccagaccgagcagatcttcacccccgaggagctcgcggag
ttcgccgcctacgaccacgacccggaccgggccaccgaactgctggaggaggcgggctgg
accaaggagaacggggtctggcacaccgccgagggccgggaggccagctacgagatcatc
ggcgtcgccggctggggcgacttcgagctgaccgccactcaggtggaggaggcctggaac
gccttcgggatcaagacgaccgcgcgcaacgtgcccgcggacaacccctggggcatctgg
gccgcaggtgacttcgaggtggccgtccgccactggggcaacccggagatcccgcagtac
tggggagccttccagatgaacttcctggtggagaacgcccgcaccggcgagaccccgggg
caggacttcgacctgaaggtggacagccccagccagggcgaggtggacctggaggcgctg
gtcgaggccgccaagaccgcgcagaccgaggaggagcagaccgaggccctcaagacgatg
gcgatcgtcttcaacgagctgctgccgcgcattccgatctggacctacaagtacctggcc
ccggccctggagggcgcgcgggtggagtccttccccgaggaccaccccgccgcccagaac
cagatctaccgggacaaccacatcatcctgtcgctgatgcagggcggcctggagacggcc
gggtag
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