Nocardiopsis akebiae: KGD83_24890
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Entry
KGD83_24890 CDS
T08903
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nake
Nocardiopsis akebiae
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nake03032
]
KGD83_24890
03036 Chromosome and associated proteins [BR:
nake03036
]
KGD83_24890
03400 DNA repair and recombination proteins [BR:
nake03400
]
KGD83_24890
DNA replication proteins [BR:
nake03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KGD83_24890
Chromosome and associated proteins [BR:
nake03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KGD83_24890
DNA repair and recombination proteins [BR:
nake03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KGD83_24890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2267
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QUX28436
UniProt:
A0ABX8C234
LinkDB
All DBs
Position
complement(5830896..5831177)
Genome browser
AA seq
93 aa
AA seq
DB search
MNKRDLIDAISDRLGDKKTATEAVNAVLDTIQATVASGDKVAITGFGVFEKSERAARTAR
NPATGATINVPASFVPKFRAGADFKALVNGDKK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcgtgacctgatcgacgcgatctccgatcggctcggagacaagaagaccgcg
accgaagcggtcaacgctgtgcttgacaccattcaggccaccgtggcgtcgggcgacaag
gtcgccatcaccggcttcggcgttttcgagaagtccgagcgcgcggcccgcacggcccgc
aaccccgccaccggcgccaccatcaacgtccccgcgagcttcgttccgaagttccgcgct
ggcgctgacttcaaggctctggtcaacggcgacaagaagtaa
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