Nocardiopsis akebiae: KGD83_25555
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Entry
KGD83_25555 CDS
T08903
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nake
Nocardiopsis akebiae
Pathway
nake03420
Nucleotide excision repair
nake03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KGD83_25555 (pcrA)
03430 Mismatch repair
KGD83_25555 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nake03400
]
KGD83_25555 (pcrA)
Enzymes [BR:
nake01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KGD83_25555 (pcrA)
DNA repair and recombination proteins [BR:
nake03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KGD83_25555 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KGD83_25555 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QUX28551
UniProt:
A0ABX8C615
LinkDB
All DBs
Position
complement(5996224..5998575)
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AA seq
783 aa
AA seq
DB search
MSSQEQLLEGLNGPQRDAVTHSGSPLLIVAGAGSGKTRVLTHRIAHLMAARGVRPGEILA
ITFTNKAAAEMRERIQALLGVRAANSMWTMTFHSACVRILRREAARLGYPSSFTIYDSAD
SARLMQLVCKEMDLDPKRFPPKSFSAQVSNLKNELVDYDTFAGQAQTEQEKKLAEAYQLY
QRRLHEAGAMDFDDLIMVTVNLFQMFPDVAEYYRRRFRHVMVDEYQDTNHAQYVFIRELV
GVAEGSDTSVVPPAELCVVGDADQSIYAFRGATIRNILEFERDFPDARTILLEQNYRSTQ
TILSAANAVIDRNEGRPAKNLWSEQGDGPAIVGYVADNEHDEAAFVVGEIDKLTDDGTLT
PSQVAVFYRTNAQSRVFEDVFIRTGLPYKIVGGVRFYERKEIRDVLAYLRVLANPEDTVS
LRRILNVPKRGIGARAEESIELFAARERISFSRALRRVDEIPGMAARSVKAVLNFTALLE
ELEKTVPEGTPAEIVEAVLSKTGYLSELAESKDLQDESRVENLEEFVDVAREFEHTFAAL
LEEEPTEDGEEAAGAVDPGTPTLVDFLERISLVADTDQIPDEDDEGGVVTLMTLHAAKGL
EFPAVFLTGMEDGVFPHTRTLGDKTQLEEERRLAYVGLTRAQRLLYVSRAAVRSAWGTPS
YNPASRFLDEIPSSLVDWRRAESTLGAPPSRSIGGRGSGGFGSGGGGGFGGTFGGGSRSR
GGAKAAKEAPTLSVGDLVNHDSFGMGRVQLVEGAGDRTKARIDFGADIGEKDFLVKYAPI
EKL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcccaagaacagcttctcgaaggtctgaacggtccccagcgcgacgccgtcacc
cacagcggctccccgctcctgatcgtggcgggtgccgggtccggcaagacccgggtcctc
acccaccgcatcgcccacctcatggccgcgcgcggtgtccgtccgggtgagatcctcgcc
atcaccttcaccaacaaggccgccgccgagatgcgcgagcgcatccaggcgctgctgggc
gtgcgcgccgccaacagcatgtggaccatgaccttccactccgcgtgcgtgcgcatcctg
cgcagggaggccgcccggctcggctatccgagcagcttcaccatctacgactccgccgac
tccgcgcgcctgatgcagctggtgtgcaaggagatggacctggaccccaagcggttcccg
cccaagtccttctccgcccaggtgtccaacctcaagaacgagctggtcgactacgacacg
ttcgccggacaggcccagaccgagcaggagaagaagctcgccgaggcctaccagctctac
cagcgccgcctgcacgaggccggcgcgatggacttcgacgacctgatcatggtcaccgtc
aacctgttccagatgttcccggacgtcgccgagtactaccggcgccgcttccggcacgtc
atggtcgacgagtaccaggacaccaaccacgcccagtacgtgttcatccgcgagctggtc
ggcgtggccgagggctccgacaccagtgtggtgccgcccgcggagctgtgcgtggtcggc
gacgccgaccagtccatctacgccttccgcggcgccaccatccgcaacatcctggagttc
gagcgcgacttccccgacgcgcgcaccatcctcctggagcagaactaccgctccacccag
accatcctgtccgcggccaacgcggtcatcgaccgcaacgagggccgcccggccaagaac
ctgtggtcggaacagggcgacgggccggccatcgtcggctacgtagccgacaacgagcac
gacgaggccgccttcgtggtcggcgagatcgacaagctcaccgacgacggaacgctcacc
ccgagccaggtcgcggtgttctaccggaccaacgcccagtcccgcgtgttcgaggacgtg
ttcatccgcaccgggctgccctacaagatcgtcggcggcgtgcgcttctacgagcgcaag
gagatccgcgacgtcctcgcctacctgcgggtcctggccaaccccgaggacaccgtcagc
ctgcggcgcatcctcaacgtgcccaagcgcgggatcggcgcccgcgcggaggagtcgatc
gagctgttcgccgcccgcgagcgcatctccttctcccgggccctgcgccgggtggacgag
atccccggcatggccgcccgctcggtcaaggcggtgctcaacttcaccgccctgctggag
gagctggagaagaccgtgcccgagggcacgcccgcggagatcgtcgaggcggtgctgagc
aagacggggtacctgtccgagctggccgagtccaaggacctccaggacgagagccgggtg
gagaacctggaggagttcgtcgacgtcgcccgcgagttcgagcacaccttcgccgccctc
ctggaggaggagcccaccgaggacggagaggaggccgccggggccgtcgacccgggaacg
ccgaccctggtcgacttcctggagcggatctccctggtcgcggacaccgaccagatcccc
gacgaggacgacgagggcggcgtggtcacgctgatgaccctgcacgcggccaaggggctg
gaattccccgcggtcttcctcaccgggatggaggacggggtgttcccgcacacccgcacg
ctcggagacaagacgcagctggaggaggagcgccgcctggcctacgtgggcctgacccgt
gcgcagcgcctgctgtacgtcagccgcgccgccgtgcgcagcgcctgggggaccccctcc
tacaaccccgcctcccgcttcctggacgagatcccctcgtccctggtcgactggcgccgc
gccgagtccaccctgggcgctccgcccagccgcagcatcggcggccggggctccgggggc
ttcggcagcggaggcgggggcggtttcggcggcaccttcggcggcggctcccggtcgcgc
gggggagcgaaggcggccaaggaagcgcccacgctcagcgtgggggacctggtcaaccac
gactccttcggcatgggccgggtgcagctggtggagggggccggggacaggaccaaggcc
cgcatcgacttcggcgcggacatcggtgagaaggacttcctggtcaagtacgcgccgatc
gagaagctctga
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