Nocardiopsis akebiae: KGD83_25725
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Entry
KGD83_25725 CDS
T08903
Name
(GenBank) HAMP domain-containing protein
Organism
nake
Nocardiopsis akebiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
GAF_2
HisKA
GAF
Laminin_II
ApoLp-III
RNase_Y_N
ATG14
Motif
Other DBs
NCBI-ProteinID:
QUX28579
LinkDB
All DBs
Position
complement(6032692..6037125)
Genome browser
AA seq
1477 aa
AA seq
DB search
MPEAVKELVADDQLDEILRALYRMRDGDFSVRLRKRGGGTMREIASVFNEVVDHSEQLSD
ELKRVGDVVRNEGRLNERVNVNPARGAWGESALALNVLLDEVAEPVTDVAGVLDSVAEGQ
LSRRASTEGRRGELKGDLLRLATTVNRMADQMSGFAGEVTRVAREVGTEGKLGGAAQVEG
VSGAWREVTESVNQMSSRLTDQMRDISEVTTAVARGDLSRKITVDVQGEMLDLKDTVNTM
VDQLSTFADEVTRVAREVGTEGKLGGRANVRGVRGIWKDLTENVNSMADNLTNQVRDISQ
VTTSVARGDLTQKVQVDVQGEMLALKNTVNTMVDQLDSFADEVTRVAREVGTEGKLGGRA
NVKGVSGIWKDLTDNVNSMANSLTYQVRNISQVTTAVATGDLTKKITVDAQGEMLDLKDT
INKMVDQLDSFAGEVTRVAREVGTEGKLAGQAHVRDVSGVWKDLTDNVNSMANNLTYQVR
QISMVTRAVAAGDLTKKVTVNAKGEILELKDTINVMVDQLSAFADEVTRVAREVGTEGKL
GGRADVKGVSGIWNDLTENVNSMSHNLTTQVRNISEVTTAVAAGDLTKKIDVNAQGEILE
VKTTVNTMVDQLSAFATEVTRVAHEVGSQGQLGGQAKVEGVTGTWKQLTDSVNGLAGNLT
TQVRAIAEVANAVAKGDLTRNIQVDARGEMEQLKHNINLMVSNLRETTATQRDADWLKSN
VARISGHIQGHRDLKELARLIMTEVTPLIGAQHGACYLPEDQDDQENFLFYAGFGFDPDE
DRRRVRAGIGLVGEALAQQVEQQVGNIPPGYVKVESGLGEASPRNLYILPIVSEGRSLGA
IEFASYDDFRESHKNFLRQLVSLLGTTINTILANNRTEDLLEQSQQLTSQLRERSNELQR
QQEELRGKNAELRQKATQLANQNRAIELQNQQIQRSRNALEERAHQLQVSSKYKSEFLAN
MSHELRTPLNSLLILARLLADNAEQNLSAKQVEFAQTIHKAGSDLLLLIDEILDLSKVEA
GRAEVQPSEVSIAQLVDYVEATFRPVTGDQGLAFAVDVSPDIPGTLWTDEQRLQQILRNL
LSNAVKFTPQGEVRLLIEPAWALEDADLEMFVENEEVIAFTVADTGIGIAEDKLQVIFEA
FHQGDGGTSRRFGGTGLGLSISRNFARLLGGEIRVQSVPNQGSTFTLLLPVRLPDDAGER
AEEAGAPGRGLSGMDSAPMLDSGRGADTGGFESSPLDDGFSMPDEDFDAALAALTDISDE
PLPTVPVLKAPETQAAAEGEAPEQPTESEPRTDPERRAVLNGQRVLIVDDDVRNVFALTS
ALEAQGLEVLYADNGHAGIARLEANEDIALVLMDVMMPELDGNQTTQRIREMPQFAGLPI
ISLTAKAMQGDRERSLAAGATDYVTKPVDLDHLLDVMRRWLTAGREETIAGAAADGGGGA
ASDGHSRATSGPEEAGAGHDNDPNGETGTSTPSEDLE
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggcggtcaaggaactggtggccgacgaccagctcgacgagattctgcgtgcc
ctgtaccgcatgcgcgacggcgacttcagcgtccgtctgcgcaagcgcggcggcggcacc
atgcgggagatcgcgtccgtcttcaacgaggtggtcgaccacagcgaacagctcagcgac
gaactcaagcgcgtcggcgacgtcgtgcgcaacgagggcaggctcaacgagcgcgtcaac
gtcaaccccgcccggggcgcctggggcgagagcgccttggcgctcaacgtcctgctcgac
gaggtcgccgaacccgtgaccgacgtcgccggggtcctggactcggtcgcggagggccag
ctcagccgccgagcctccaccgagggccgccgcggcgagctcaagggagacctgctgcgc
ctggccaccacggtcaaccgcatggccgaccagatgagcggcttcgccggggaggtcacc
cgggtggcccgcgaggtgggcaccgagggcaagctcggcggcgccgcgcaggtcgagggg
gtctccggggcctggcgcgaggtgaccgagtcggtcaaccagatgtcctcgcgcctgacc
gaccagatgcgcgacatctccgaggtgaccaccgccgtcgcccgcggcgacctcagccgc
aagatcacggtggacgtacagggcgagatgctcgacctcaaggacaccgtcaacacgatg
gtggaccagctgtccaccttcgccgacgaggtgacccgggtggcccgtgaggtgggcacc
gagggcaagctcggcggacgcgccaacgtgcgcggcgtgcggggcatctggaaggacctc
accgagaacgtcaactcgatggcggacaacctcaccaaccaggtgcgcgacatctcccag
gtgacgacctccgtggcccggggcgacctcacccagaaggtccaggtcgacgtgcagggc
gagatgctcgccctgaagaacaccgtgaacaccatggtcgaccagctcgactccttcgcc
gacgaggtcacgcgcgtggcgcgcgaggtcggcacggagggcaagctgggcgggcgggcc
aacgtcaagggcgtgtcgggcatctggaaggacctgaccgacaacgtcaactccatggcc
aacagcctcacctaccaggtccgcaacatctcccaggtgacgacggcggtcgccaccggt
gacctcaccaagaagatcaccgtggacgcccagggggagatgctcgacctcaaggacacc
atcaacaagatggtcgaccagctggactccttcgccggggaggtgaccagggtcgcccgc
gaggtgggcaccgagggcaagctggccgggcaggcccacgtccgcgacgtgtccggggtc
tggaaggacctgaccgacaacgtcaactccatggccaacaacctgacctaccaggtgcgc
cagatctccatggtcacgcgcgcggtggccgcgggcgacctgaccaagaaggtcacggtc
aacgccaagggcgagatcctggagctgaaggacaccatcaacgtcatggtggaccagctc
tccgcgttcgccgacgaggtcacgcgcgtggcgcgcgaggtcggcacggagggcaagctg
ggcggccgcgccgacgtcaagggcgtctccggcatctggaacgacctcaccgagaacgtc
aactcgatgtcgcacaacctcaccacgcaggtgcgcaacatctccgaggtgaccacggcc
gtcgccgcgggcgacctcaccaagaagatcgacgtcaacgcccagggggagatccttgag
gtcaagacgacggtcaacaccatggtcgaccagctgtcggcgttcgccaccgaggtcacc
cgagtggcccacgaggtgggcagccagggccagctgggcggtcaggccaaggtcgagggc
gtgaccggcacctggaagcagctcaccgacagcgtgaacggcctggcgggcaacctgacc
acgcaggtgcgggcgatcgccgaggtcgccaacgccgtcgccaagggcgacctgacccgc
aacatccaggtcgacgcccgcggtgagatggagcagctcaagcacaacatcaacctgatg
gtgtccaacctgcgcgagaccaccgccacccagcgcgacgccgactggctcaagtccaac
gtggcccgcatctccggccacatccagggccaccgcgacctcaaggagctggcccgcctc
atcatgaccgaggtgacgccgctcatcggcgcccagcacggcgcctgctacctgcccgag
gaccaggacgaccaggagaacttcctgttctacgcgggcttcggcttcgaccccgacgag
gaccggcgccgcgtccgcgcgggcatcggcctggtgggcgaggccctcgcccagcaggtg
gagcagcaggtcggcaacatcccgccgggctacgtcaaggtcgagtcggggctgggggag
gcctccccgcgcaacctgtacatcctgccgatcgtctcagaggggcgctcgctgggcgcc
atcgagttcgcctcctacgacgacttccgcgagagccacaagaacttcctgcgccagctg
gtgagcctgctcggcaccaccatcaacaccatcctggccaacaaccgcaccgaggacctg
ctcgaacagtcccagcagctcaccagccagctcagggagcgctccaacgagctccagcgc
cagcaggaggagctgcgcggcaagaacgccgagctccgccagaaggccacccagctcgcc
aaccagaaccgggcgatcgagctccagaaccagcagatccagcgctcccgcaacgccctg
gaggagcgcgcccaccagctccaggtctcctccaagtacaagtccgagttcctggcgaac
atgtcgcacgagctgcgcacgccgctcaacagcctgctcatcctggcccgcctgctggcc
gacaacgccgagcagaacctgtccgccaagcaggtcgagttcgcccagaccatccacaag
gcgggcagcgacctgctgctgctcatcgacgagatcctcgacctgtccaaggtggaggcc
gggcgcgccgaggtgcagcccagcgaggtctccatcgcccagctggtcgactacgtcgag
gccaccttccgcccggtcaccggggaccaggggctcgccttcgcggtggacgtgtcgccg
gacatccccggcacgctgtggaccgacgagcagcggctccagcagatactgcgcaacctg
ctctccaacgccgtcaagttcaccccgcagggggaggtgcggctgctcatcgagcccgcg
tgggcgctggaggacgccgacctggagatgttcgtcgagaacgaggaggtcatcgcgttc
accgtcgccgacaccggcatcgggatcgccgaggacaagctccaggtcatcttcgaggcc
ttccaccagggcgacggcggcacctcgcggcgcttcggcgggaccggcctcggcctgtcc
atcagccgcaacttcgcccggctgctgggcggcgagatccgcgtgcagagcgtccccaac
cagggctccaccttcacgctgctgctcccggtgcgcctgcccgacgacgcgggggagcgg
gcggaggaggccggggccccgggccgcggcctgagcggcatggactcggcgccgatgctc
gactcgggccggggcgcggacaccggcggcttcgaatcctccccgctggacgacggcttc
tccatgccggacgaggacttcgacgcggccctggccgccctcaccgacatcagcgacgag
ccgctgcccacggtcccggtgctcaaggcgcccgagacccaggcggcggccgagggcgag
gcgcccgagcagccgaccgagtccgagcctcgcaccgaccccgagcggcgggccgtcctg
aacggccagcgggtcctcatcgtcgacgacgacgtccgcaacgtcttcgcgctcaccagc
gctctggaggcgcagggcctggaggtcctctacgctgacaacgggcacgccggaatcgcc
aggctggaggccaacgaggacatcgcgctcgtcctgatggacgtgatgatgcccgagctg
gacggcaaccagaccacccagcggatccgggagatgccgcagttcgccggtctgccgatc
atctcgctcaccgccaaggcgatgcagggcgaccgcgagcgcagcctcgcggcgggcgcc
acggactacgtgaccaagccggtcgacctggaccacctgctggacgtcatgcggcgctgg
ctcaccgcggggcgtgaggagaccatcgccggagcggcggccgacggcgggggcggcgct
gcctcggacgggcacagccgcgcgacgtccgggccggaggaggccggtgccgggcatgac
aacgatccgaacggggagactggcaccagcaccccgagcgaagacctggagtaa
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