Nocardiopsis akebiae: KGD83_26735
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Entry
KGD83_26735 CDS
T08903
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nake
Nocardiopsis akebiae
Pathway
nake00040
Pentose and glucuronate interconversions
nake01100
Metabolic pathways
nake02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KGD83_26735
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KGD83_26735
Enzymes [BR:
nake01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KGD83_26735
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QUX28761
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Position
complement(6241971..6243254)
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AA seq
427 aa
AA seq
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MRRLVLPLSAVLVMTAVAPVQAAPDVGRQVLPEGDGWASAGGGTTGGADASPENVLRVST
AQEFREAVSGDEPKIVYVEGLIDANTAPDGTPLSCGDYAVDGYTLEDYLTAYDPEVWGWQ
DPSGPLEEAREASADAQAERVRVEVGSNTTVVGAGDGAEITGMSIRVIGASNVILRDLTL
SDTHDCFPGWDPGDGGEGNWNSEYDHLEISGSTNVWIDHNTFDDGDNPGSELPEYFGRRY
EVHDGLLDIVRASDLVTVSYNHFEGRDKAILVGNSDGRTTDRRYLRTTWHHNHFDGLGQR
APRVRYGQVHVYNNHYTVATDLYQYSLGVGFESHLYAENNLFDLRDGITAGEIVGNWGGT
DIVEHGNAVMEDGRGRVTEVDLVREHNDAYPDQALGTDLTWVPQFSTRVEPVHAVRGVPR
EAGAGVL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggctcgtactccctctgagcgcggtgttggtgatgaccgccgtcgcgcccgtc
caggcggcgcccgacgtgggcaggcaggtcctgcccgagggcgacggctgggcctcggcc
ggaggcgggacgacgggaggcgcggacgcctccccggagaacgtcctccgcgtctccacg
gcgcaggagttccgcgaggcggtgagcggtgacgagcccaagatcgtctacgtcgagggc
ctcatcgacgcgaacacggcgccggacggcacgcccctgtcgtgcggggactacgccgtg
gacggctacacgctggaggactacctgaccgcctacgaccccgaggtgtggggctggcag
gaccccagcggcccgctggaggaggcccgcgaggcctcggccgacgcccaggcggagcgc
gtccgggtggaggtcggatccaacacgaccgtggtgggcgccggggacggcgccgagatc
accgggatgagcatccgggtgatcggcgcgagcaacgtcatcctgcgcgacctcaccctg
tccgacacgcacgactgcttcccgggctgggaccccggcgacggcggtgagggcaactgg
aactccgagtacgaccacctggagatctccggttccacgaacgtgtggatcgaccacaac
acgttcgacgacggcgacaacccgggctcggagctgccggagtacttcgggcgccggtac
gaggtgcacgacggcctgctcgacatcgtgcgcgccagcgacctggtgacggtgtcctac
aaccacttcgaaggccgggacaaggccatcctggtgggcaacagcgacggccgcaccacc
gatcgcaggtacctgcgcaccacctggcaccacaaccacttcgacggcctgggccagcgc
gcgccccgcgtgcgctacgggcaggtgcacgtctacaacaaccactacacggtggccacg
gacctgtaccagtacagcctgggcgtgggcttcgagtcgcacctgtacgcggagaacaac
ctgttcgacctgcgcgacggcatcacggccggggagatcgtcggcaactggggcggcacc
gacatcgtggagcacgggaacgcggtgatggaggacggccgcgggcgcgtcacggaggtg
gacctggtgcgggagcacaacgacgcctaccccgatcaagcgctgggcaccgacctgacc
tgggtgccgcagttctccacgcgggtggaaccggtgcacgcggtccgcggcgtgccgcgc
gaggcgggcgcgggagtgctctga
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