Nocardiopsis akebiae: KGD83_27570
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Entry
KGD83_27570 CDS
T08903
Name
(GenBank) hypothetical protein
Organism
nake
Nocardiopsis akebiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T7SS_signal
DUF3375
PGPGW
Motif
Other DBs
NCBI-ProteinID:
QUX28906
LinkDB
All DBs
Position
complement(6425285..6429952)
Genome browser
AA seq
1555 aa
AA seq
DB search
MAKQPRTHHRWDLLDREGDPVPWSAYDVRSLKTFYEGLADAAEQAAADLRRLDKGRLGEG
STVDALKELIEELPKYLDKAHNAYEKGYKALETWTGALETAREQSGIIVFEAEQAYLALE
DPEEWKRETDGDDPVRDAYVTRLQTVLGDMDDAVSTCKNALEEAKQGDPNELWGWLDAIV
TWVEENPLIYAAILVVGGIAAIFIPGLGIALALGALAISASTLHREGKLGFNMETVTTLG
LDLISLVPGGVLLRGGRAVTRGLTAAAPRVTGSISSGVRSASSAVRGATSGVRGAVGGNR
AVRTVTSTVGRVSRDHPIISTTITTGARDTAVGMGSSIAVQMAAGTSWEDIDLGYELASA
AATNVPGAAVGAARDHGSLPSFLGGSDGSGGGSGPAPGPDPAPTVGDGAPPEPAAAPATP
DAAVGSGDSDTGGNPATSEPAVTPSAPDTGGIPSTPEPAAAPATPDAAVGSGDSDTGGNP
ATSEPAVAPSAPDTGGAPATADAGGTPGAADPSRSPGDGPDASPQGGTTSSATADSTDGG
PGPEGQRFEGEYGGSTGGANVAGEGVRLPSQRPGQPGEPMVDDRVPHRNDTSAAGRPGGE
APAASGRAGQDEGAAAPTGPRAEDTPAGPDDGVPSATHDGTGAAEGRTVASGDFGEYRTG
RGPDGERSVSYRYPADGGDYTMDVTRDGVDVNGTSVRRTDDGFQVARPDGASVTASRGGN
DEPRGVTLTGPDGAPGASYRDGEVRVPTADGDVTASRDGDGSTIRTGDGLTVQQPRGDGD
VRITRGGDGPVDLRFENGGPEISRPGNDGSSAVPRTRVTDPATGRSTEIGPDGYRLDTGG
ATSQSYDRGTDSATVDSGDTRIRADQHEVRVTDGARGVDLWQGRDGAGAATGANSRAVVR
PDGSAEIRTDNPSLTPRAVQDANGHVTVGDTRTAPGRVRTEDGAAVGITERDGRTVVEVR
GTDGATRSYGTDGRPHGPYPPLRTDPATGQPCVLTGGTRVTLVQGSDPALRVDTPQGWTV
TTSRDGQSSVSTPPDARGDRLQTVREPDGSTAMRSGDHWVASGPERPGGPGRVVAGGPEG
VHARSSADGAHVSDGTTRTDARPGASPGLGRGETTHAAPPYGPVAEHSGTGGRVTTDDGI
TVHTRADGLRVDVPRDADRTVRDGDRTIGVGPRGTDVRGPSPDSQGNPPLRMGETAGDAG
RVPPRWRVSADPEGGMTGHTRPDQGVSVRPEPGRLPSPFRGADEVGFRSGDIEGTQTRSG
RTTVTDGTGSTVRDGRGGVRVDGGDGRPDLRVTEDHVRVTTPGGAQHRVDVPGARADDGG
LTGTPRTDGAPAVRTDGDGAPARTDDGTGASGGRRDGDSPDGDRSPVRPSLNSFGAMLEE
MRLTLAKNFVNVLGGLGVEIAWQEFADGDFTGTDVVQAVVQLGTAVPKGLAEGRISGTTA
LPTDGTGSHLAAFPLEMGHQAVRNDLRDLITGEYLEEESAITAERGAIAEQAGFLDEELI
PELDAEIGALEADTSRTPEEERVLERLNAVRDAAEALSADLARRDAELDERVNLL
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagcaaccgcgcactcaccacaggtgggacctcctcgacagggagggggacccg
gttccgtggtccgcctacgacgtacgttcgctcaagacgttctacgaggggctggcggac
gccgccgagcaggccgccgccgacctccggaggctggacaaggggcgactgggcgagggc
agcaccgtcgacgccctcaaggaactcatcgaggaactgcccaagtacctggacaaggca
cacaacgcctacgagaagggctacaaggccctcgaaacctggacgggcgcgctggagacg
gcccgcgagcagagcgggatcatcgtcttcgaggccgaacaggcctacctcgccctggag
gaccccgaggagtggaagcgggagacggacggtgacgaccccgtccgcgacgcatacgtc
acgcgcctccagacggtgctcggtgacatggacgacgccgtcagcacctgcaagaacgcc
ttggaggaggccaagcagggcgatccgaacgagctgtggggatggctcgacgcgatcgtc
acgtgggtcgaggagaaccccctcatctacgcggcgatcctcgtggtcggcggtatcgcc
gccatcttcatcccgggcctgggcatcgccctggccctcggggcgctcgcgatcagcgcg
tccaccctccaccgtgagggcaagctcggtttcaacatggagacggtcaccaccctcggc
ctggacctgatctccctcgtccccggcggtgtgctcctgcgcggcgggcgcgcggtgacc
cggggtctgaccgccgcggctccgcgcgtgaccggaagcatctcctcgggagtgcgcagc
gcctcctcggcggtgcggggcgccaccagcggggtacggggcgcggtgggcggcaaccgc
gccgtccggaccgtcacgtcgacggtgggccgcgtcagccgggaccacccgatcatctcc
acgaccatcaccaccggcgcccgggacaccgccgtcggcatgggctcctcgatcgccgtc
cagatggccgccggtacctcctgggaggacatcgacctcgggtacgaactcgccagcgcc
gccgcgaccaacgtgcccggcgccgccgtcggcgccgcccgcgaccacggatcgctgccg
tccttcctgggcggctccgacggttcgggcggcggctccggccccgctccggggcccgat
cccgcgcccacggtcggcgacggcgcgcccccggaaccggcggccgctccggccacgccc
gacgccgccgtgggctccggcgactccgacacgggcgggaacccggccacgtcggaaccc
gccgtcaccccgtccgctcctgacacgggcggaatcccctccaccccggaaccggcggcc
gctccggccacgcccgacgccgccgtgggctccggcgactccgacacgggcgggaacccg
gccacgtcggaacccgccgtcgccccgtccgctcctgacaccggcggtgctcccgcgacc
gccgacgcgggcggcactcccggagccgccgacccctcccgctccccgggggacggcccg
gacgcctccccgcagggcggtacgacctcctccgccaccgcggactcgacggacggcggg
cccggtcccgagggccagcgcttcgagggcgagtacgggggctccacgggcggggccaac
gtcgcgggcgagggcgtacgcctgccctcccagcgcccgggccagcccggggagccgatg
gtcgacgaccgcgtgccgcaccggaacgacacctccgccgcggggcggcccggcggggag
gccccggccgcatccggccgggcgggccaggacgagggggccgcagcgcccacgggaccg
cgggcggaagacaccccggccggccccgacgacggcgtgccctccgccacgcacgacggc
acgggagcggcggagggccgcaccgtggcctccggcgacttcggcgagtaccgcaccggc
cggggaccggacggggagcgcagcgtctcctaccgctatccggcggacggcggcgactac
accatggacgtcacccgcgacggagtggacgtcaacggcacctcggtgcggcgtaccgac
gacggcttccaggtggcccggccggacggcgcgtcggtcacggcctcacgcggcgggaac
gacgagccgcggggcgtcaccctgaccggaccggacggcgcccccggcgcctcctaccgg
gacggggaggtgcgcgtccccaccgcggacggcgacgtcaccgcctcccgggacggcgac
ggctccaccatccggaccggcgacggcctcaccgtccagcagccccgcggcgacggcgac
gtccgcatcacccggggcggagacgggccggtcgacctgcggttcgagaacgggggcccg
gagatctcccggcccgggaacgacggctcctccgccgtgccgcgcacccgggtgaccgac
cccgccaccggccggagcacggagatcggccccgacggctaccggctcgacaccgggggc
gctacctcgcagagctacgaccgcgggaccgacagcgccaccgtggactccggagacacc
cggatccgggccgaccagcacgaggtcagggtgaccgacggcgcgcgcggagtcgacctg
tggcagggccgtgacggtgcgggcgccgccacgggcgccaactccagggcggtcgtccgg
ccggacggcagcgccgagatcaggacggacaacccctcgctgaccccgagggccgtccag
gacgcgaacggccacgtcaccgtcggggacacccgtaccgcgccggggcgtgtgcgcact
gaggacggtgccgccgtcgggatcaccgaacgggacggccggaccgtcgtggaggtgcgc
ggaaccgacggggccacgcgctcctacggcaccgacggccgcccccacgggccctacccg
ccgctgcgcaccgatcccgctacgggccagccctgcgtgctcacgggcggcaccagggtg
accctcgtccagggctcggaccccgcgctgcgggtggacaccccccagggctggaccgtg
accacctcgcgcgacggccagtcctcggtgagcacgcccccggacgcccggggagaccgg
ctccagaccgtccgcgaacccgacggttccaccgcgatgaggagcggcgaccactgggtc
gcctccggacccgagaggcccggcggtcccgggcgcgtggtggcgggcggacccgaaggc
gtccacgcccgcagctccgccgacggcgcccacgtgtccgacggaacgacgcggacggac
gcccggccgggggcctcgcccggtctggggaggggggagaccacgcacgcggcgcccccc
tacgggccggtggccgagcactcgggcacgggaggccgcgtgaccaccgacgacgggatc
accgtccacacgcgcgcggacgggctccgggtggacgtgccccgcgacgcggaccgcacc
gtccgcgacggcgaccgcaccatcggcgtcggtccccgcggcaccgacgtgcgcgggccc
tccccggacagccagggcaaccccccgctgcgcatgggcgagaccgccggggacgcgggc
agggtcccgccgcgctggcgcgtgtccgcggaccccgaaggaggcatgaccgggcacacc
cgccccgaccagggcgtcagcgtgcggcccgagccgggcaggctcccgtccccgttccgc
ggggccgacgaggtcggcttccggtcgggggacatcgagggaacccagacgcgctcgggc
cggaccacggtcaccgacggcaccggcagcacggtccgggacggccggggaggggtccgg
gtggacggcggcgacggccgtcccgacctgcgcgtcaccgaagaccacgtccgggtgacc
actcccgggggcgcgcagcaccgggtggacgttcccggcgcacgcgccgacgacggcggc
ctcaccggtacgccccgcaccgacggcgccccggctgtgcggaccgacggtgacggagcc
cccgcgcgcaccgacgacggcaccggtgcctccggcggccggcgggacggggactccccg
gacggggaccgttccccagtgcggccgagcctcaacagcttcggcgccatgctggaggag
atgcgcctgacgctcgccaagaacttcgtcaacgtcctcggcggcctgggagtggagatc
gcctggcaggagttcgccgacggcgacttcacgggtaccgacgtcgtccaggccgtcgtc
cagctgggtaccgccgttcccaagggcctggccgagggccggatctccgggaccaccgcg
ctgccgacggacggcacggggtcccatctggcggccttcccgctggagatgggccaccag
gcggtgcgcaacgacctgcgcgacctgatcacgggggagtacctcgaagaggagtccgcc
atcaccgcggagaggggtgccatcgcggaacaggccggcttcctcgacgaggagctgatc
cccgagctggacgcggagatcggtgcgctggaggcggacaccagccgcacgccggaggag
gagagggtcctggaacggctgaacgcggtcagggacgcggccgaggcgctgagcgcggac
ctggccaggagggacgccgagctcgacgagagggtcaacctcctctag
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