KEGG   Nocardiopsis akebiae: KGD83_28200
Entry
KGD83_28200       CDS       T08903                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nake  Nocardiopsis akebiae
Pathway
nake00010  Glycolysis / Gluconeogenesis
nake00020  Citrate cycle (TCA cycle)
nake00260  Glycine, serine and threonine metabolism
nake00280  Valine, leucine and isoleucine degradation
nake00310  Lysine degradation
nake00380  Tryptophan metabolism
nake00620  Pyruvate metabolism
nake00630  Glyoxylate and dicarboxylate metabolism
nake00640  Propanoate metabolism
nake00670  One carbon pool by folate
nake00785  Lipoic acid metabolism
nake01100  Metabolic pathways
nake01110  Biosynthesis of secondary metabolites
nake01120  Microbial metabolism in diverse environments
nake01200  Carbon metabolism
nake01210  2-Oxocarboxylic acid metabolism
nake01240  Biosynthesis of cofactors
Module
nake_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nake_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nake_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
nake_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nake_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nake00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    KGD83_28200 (lpdA)
   00020 Citrate cycle (TCA cycle)
    KGD83_28200 (lpdA)
   00620 Pyruvate metabolism
    KGD83_28200 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    KGD83_28200 (lpdA)
   00640 Propanoate metabolism
    KGD83_28200 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    KGD83_28200 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    KGD83_28200 (lpdA)
   00310 Lysine degradation
    KGD83_28200 (lpdA)
   00380 Tryptophan metabolism
    KGD83_28200 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    KGD83_28200 (lpdA)
   00670 One carbon pool by folate
    KGD83_28200 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nake04147]
    KGD83_28200 (lpdA)
Enzymes [BR:nake01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     KGD83_28200 (lpdA)
Exosome [BR:nake04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   KGD83_28200 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA HI0933_like DAO Thi4 FAD_oxidored FAD_binding_3 NAD_binding_8 FAD_binding_2 3HCDH_N Amino_oxidase ApbA ThiF 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: QUX29020
LinkDB
Position
6568239..6569642
AA seq 467 aa
MGQRHFDLVVLGAGPGGYVAAIRAAQLGLKTAVIEEKYWGGVCLNVGCIPSKALLRNAEL
AHLFQNEADFFGIKVEGRVEFDFGKAHSRSREVADGRVKGVHYLMKKNKITELNGRGTFT
DDHTVEVSGEDGATETVTFDHAVIAAGSSTKLLPGTELSERVVTYEEQILTDTLPESIVI
AGAGAIGVEFAYVLANYGVDVTIVEFLDRLVPTEDEEVSKELGRAYKKLGVKVMTSTRVE
SVEDTGEGVRVTVSSGGKEQTLEADKLLQAIGFAPNVEGYGLEKTGVELTDRGAIAIDSR
GRTNVPHVYAIGDVTAKLMLAHTAEAMGIVAAETIAGAETQEIDYRFIPRATYCQPQIAS
FGYSEKEAREAGFDVQVAKFPFMANGKAHGLGDTRGFVKILSDGKYGEFLGAHMIGPDVT
ELLPELTLAQQWDLTVHEVARNIHAHPTLSEAVKEAVHGLAGHMINM
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgggacagcgacacttcgatctggtggttctcggcgcgggccccggcggctacgtggcc
gccatccgcgccgcccagctcggcctgaagaccgccgtcatcgaggagaagtactggggc
ggggtctgcctcaacgtgggctgcatcccctccaaggcgctgctgcgcaacgccgaactc
gcccacctgttccagaacgaggccgacttcttcggcatcaaggtcgagggcagggtcgag
ttcgacttcggcaaggcgcacagccgcagccgcgaggtggcggacggccgggtcaagggc
gtccactacctgatgaagaagaacaagatcaccgagctgaacggccggggcaccttcacc
gacgaccacaccgtcgaggtcagcggcgaggacggcgccaccgagaccgtcaccttcgac
cacgcggtgatcgcggcgggctcctccaccaagctgctgcccggcacagagctgtccgag
cgggtcgtcacctacgaggagcagatcctcaccgacaccctgccggagagcatcgtcatc
gccggtgcgggcgccatcggcgtcgagttcgcctacgtcctggccaactacggcgtggac
gtgacgatcgtggagttcctcgaccgcctcgtgcccaccgaggacgaggaggtctccaag
gagctgggccgcgcctacaagaagctgggcgtcaaggtgatgacctccacccgcgtggag
tcggtcgaggacaccggcgagggcgtgcgcgtcaccgtgagcagcggcggcaaggagcag
accctggaggccgacaagctcctccaggccatcggcttcgcccccaacgtggagggctac
ggtctggagaagaccggcgtggagctgaccgaccggggcgcgatcgccatcgactcccgg
gggcgcaccaacgtcccgcacgtctacgcgatcggcgacgtcaccgccaagctgatgctg
gcccacaccgccgaggccatgggcatcgtcgccgcggagaccatcgcgggcgccgagacc
caggagatcgactaccggttcatcccgcgcgccacctactgccagccgcagatcgccagc
ttcggctacagcgagaaggaggcgcgggaggcgggcttcgacgtccaggtcgccaagttc
ccgttcatggccaacggcaaggcgcacggcctcggggacacgcgcggtttcgtcaagatc
ctctccgacggcaagtacggggagttcctcggcgcgcacatgatcggcccggacgtgacc
gagctgctgcccgagctgaccctggcccagcagtgggacctgaccgtgcacgaggtcgcg
cgcaacatccacgcgcaccccacgctcagcgaggcggtcaaggaggccgtgcacggcctg
gccggtcacatgatcaacatgtga

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