Nocardiopsis alba: B005_0258
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Entry
B005_0258 CDS
T02218
Name
(GenBank) periplasmic sugar-binding domain protein
KO
K10439
ribose transport system substrate-binding protein
K10440
ribose transport system permease protein
Organism
nal
Nocardiopsis alba
Pathway
nal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B005_0258
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
B005_0258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nal02000
]
B005_0258
Transporters [BR:
nal02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
B005_0258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
Peripla_BP_3
DUF3611
Motif
Other DBs
NCBI-ProteinID:
AFR07164
UniProt:
J7L8P9
LinkDB
All DBs
Position
265349..267286
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AA seq
645 aa
AA seq
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MATDTAKSGGARSVVGRFLLENGALTALAVLVVVMSLLSGDFLTAQNLLNVGVQAAVIAV
LAFGVTFVIISGGIDLSVGSVAALSATALAFLAAVDGVPIWLAVVLAAATGTACGLVNGA
LIAYGKLPPFIATLAMLSIGRGLSLVISEGSPIALPDPVARLGDSLGGWFPVPVLIMLLM
GLVTAVILRRTFTGRAMYAIGGNEEAARLSGIRVERQKLGIYALSGLFAAVAGVILAARL
ASAQPQAAQGYELDAIAAVVIGGASLAGGVGTALGTLIGALILAVLRNGLNLLSVSAFWQ
QVVIGVVIALAVLFDTLRRRSGGAGGGPGAGGPGVGGGRRGVRLALAAAVTALVVGALSF
LVPNSSSDGPRVGMSLSTLNNPFFLQMRDGAQEEADEAGVNLIVTDAQDDASQQADQIQN
FISTGVDAMVLNPVDSDASGPPVRGANNADIPVIAADRGVEGAEVETLVASDNVEGGREA
ARVMADALGEEGRIVVLQGTPGTSASRERGSGFAEGIAEFPDIEVVSQQPADFDRSRGLD
VMTNMLQSNGDVDGVFAENDEMALGAAAALSSAGKEAVVIGFDGTPEGVDAVGEGVLYAT
IAQRPAELGRAAVRNAIAVIEGERIEETVKVPVEVVTEDNVDDFS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggccactgacacagcaaagagcggcggcgcccggtccgtcgtcggccgtttcctgttg
gagaacggggccctgaccgcgctggccgtcctggtcgtggtcatgtcgctgctctccggc
gacttcctgaccgcgcagaaccttctgaacgtcggtgtccaggcggccgtcatcgcggtc
ctggccttcggcgtcaccttcgtcatcatctccggcgggatcgacctgtcggtggggtcg
gtggcggccctgtcggcgacggcgctggccttcctcgccgcggtcgacggggtgccgatc
tggctggccgtggtgttggccgccgccacgggtaccgcctgtggtctggtcaacggggcc
ctgatcgcctacggcaagcttccgccgttcatcgccactctggcgatgctctccatcgga
cgcgggctctccctggtgatctccgagggcagcccgatcgcgctgccggacccggtggcc
cgtctgggcgactccctcggcggctggttccccgtccccgtgctgatcatgctcttgatg
ggtctggtcaccgccgtgatcctgcgccggaccttcaccgggcgcgcgatgtacgcgatc
ggcggcaacgaggaggcggcccgcctgtccgggatccgggtcgagcggcagaagctgggc
atctacgcgctctcgggtctgttcgcggccgtcgccggtgtcatcctggcggcccgtctg
gcctcggcccagccgcaggcggcccagggttacgaactcgacgcgatcgccgccgtcgtc
atcggcggcgccagcctcgccgggggtgtgggcaccgctctgggcaccctgatcggcgcg
ctgatcctcgcggtgctgcgcaacggcctcaacctgctctcggtctcggcgttctggcag
caggtcgtgatcggtgtggtcatcgcgctcgccgtcctgttcgacacgctgcgccgccgt
tccggtggcgcgggcggtggtccgggcgcgggcggtccgggtgtcggcggtggtcgacgc
ggggtccgtctcgcgctcgcggccgcggtcaccgcgctggtcgtgggggcgctgtccttc
ctggtcccgaactcctcctccgacggtccccgggtggggatgtcgctgtcgacgctcaac
aacccgttcttcctccagatgcgcgacggcgcgcaggaggaggcggacgaggccggggtg
aacctgatcgtcaccgacgcccaggacgacgcctcgcagcaggccgaccagatccagaac
ttcatcagcaccggtgtcgacgccatggtgctcaacccggtggactccgacgcctccggc
cccccggtgcgcggcgccaacaacgccgacatcccggtgatcgccgccgaccgcggtgtc
gagggcgccgaggtggagaccctggtcgcctccgacaacgtcgagggcggtcgtgaggcg
gcccgggtgatggccgacgcgctcggtgaggagggtcggatcgtggtgctccagggcacc
cccggcacctccgccagccgggagcgcgggtccggtttcgccgaggggatcgccgagttc
cccgacatcgaggtcgtctcgcagcagcccgcggacttcgatcgttcacgcggcctggac
gtgatgaccaacatgttgcagagcaacggcgacgtggacggtgtcttcgcggagaacgac
gagatggccctgggcgcggccgcggcgctctcctccgcggggaaggaggccgtggtgatc
ggcttcgacggcacccccgagggcgtcgacgcggtcggtgagggcgtcctctacgccacc
atcgcccagcggccggccgagctgggtcgggccgccgtgcgcaacgcgatcgccgtgatc
gagggtgagcggatcgaggagaccgtgaaggtgccggtggaggtcgtcaccgaggacaac
gtcgacgacttctcctga
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