Nocardiopsis alba: B005_0722
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Entry
B005_0722 CDS
T02218
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nal
Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nal03016
]
B005_0722 (truB)
Enzymes [BR:
nal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B005_0722 (truB)
Transfer RNA biogenesis [BR:
nal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B005_0722 (truB)
Prokaryotic type
B005_0722 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
NNH6
Motif
Other DBs
NCBI-ProteinID:
AFR10112
UniProt:
J7LHM0
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All DBs
Position
complement(737257..738090)
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AA seq
277 aa
AA seq
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MADSGVVVVDKPRRVGHAGTLDPMATGVLVLGIEKGTKLLGHLTLTEKTYEATIRLGLVT
NTDDAEGEPGARVDASAVSDEDVRAAVAKLTGPIQQIPPQVSAIKVNGERAYKAARAGRE
VELKARTVTIERFEVTDIRRESDADGVLVDVDAVITCSSGTYIRSLARDMGADLGVGGHL
TALRRTRVGPYDLSQARTLDQLAKEFTQVPLARAVAAAFPVRTMDEAETRAIRHGNRIGE
SSLGEGPIGLFAPDGTVVALGENRPGHMKPVVVFDPA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagtggcgtcgtggtcgtcgacaagccccgccgcgtggggcacgcggggacc
ctggacccgatggccaccggtgtgctggtcctggggatcgagaagggcaccaaactgctc
ggtcacctgaccctgacggagaagacctacgaggccacgatccgactcggtctggtgacc
aacaccgacgacgccgagggcgagcccggggcccgggtcgacgcctccgccgtgtccgat
gaggacgtgcgtgcggcggtggcgaagctgaccggccccatccagcagatcccgccgcag
gtcagcgcgatcaaggtgaacggtgagcgcgcctacaaggcggcccgcgccggtcgggag
gtcgagctcaaggcccgtacggtcacgatcgaacggttcgaggtcaccgacatccgtcgt
gagagcgacgccgacggcgtcctcgtggacgtggacgcggtgatcacctgttccagtggg
acctacatccgttcgctcgcccgggacatgggcgccgacctgggagtgggcggtcacctg
accgccctgcgccgtacccgggtggggccctatgacctgtcccaggcccggaccctggac
cagctcgccaaggagttcacgcaggtaccgctcgcccgggccgtggccgccgcgttcccg
gtgcgcaccatggacgaggccgagacccgtgccatccgtcacggcaaccgcatcggtgag
agctctctgggggagggaccgatcggactcttcgcccccgacggcacggtggtggccctg
ggcgagaaccggcccggtcacatgaagccggtggtcgtcttcgaccccgcctga
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