Nocardiopsis alba: B005_0807
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Entry
B005_0807 CDS
T02218
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
nal
Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nal03032
]
B005_0807 (hupB)
03036 Chromosome and associated proteins [BR:
nal03036
]
B005_0807 (hupB)
03400 DNA repair and recombination proteins [BR:
nal03400
]
B005_0807 (hupB)
DNA replication proteins [BR:
nal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B005_0807 (hupB)
Chromosome and associated proteins [BR:
nal03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
B005_0807 (hupB)
DNA repair and recombination proteins [BR:
nal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
B005_0807 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Barstar
Arteri_nsp7a
HU-CCDC81_euk_2
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
AFR06132
UniProt:
J7L6Q8
LinkDB
All DBs
Position
complement(827816..828088)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSEIIDNIAASADIPKAVAGKALDAFVDSVTGALKEGDDVVLVGFGTFSVKERAERTG
RNPSTGAAIKIPAAKVPSFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagcgagatcatcgacaacatcgcggcctcggccgacatacccaaggccgtc
gccggcaaggccttggacgcgttcgtcgactcggtgaccggggccctcaaggagggcgac
gacgtggtcctcgtcggcttcggcaccttcagtgtcaaggagcgcgccgagcggaccggc
cgcaacccctccacgggtgccgccatcaagatccccgcggcgaaggtgccctccttcaag
gcgggcaagggcctcaaggacgccgtcaactag
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