Nocardiopsis alba: B005_0986
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Entry
B005_0986 CDS
T02218
Name
(GenBank) uvrD/REP helicase N-terminal domain protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nal
Nocardiopsis alba
Pathway
nal03420
Nucleotide excision repair
nal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B005_0986
03430 Mismatch repair
B005_0986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nal03400
]
B005_0986
Enzymes [BR:
nal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B005_0986
DNA repair and recombination proteins [BR:
nal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B005_0986
MMR (mismatch excision repair)
Other MMR factors
B005_0986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AFR10973
UniProt:
J7LBE8
LinkDB
All DBs
Position
complement(1024049..1026157)
Genome browser
AA seq
702 aa
AA seq
DB search
MDPDRVLEGLDPEQTQAARALRGPVCILAGAGTGKTRAITHRIAHAVAGGVVSEQQVLAV
TFTARAAGEMRGRLRSLGAPKVQARTFHSAALRQLGFFWGEAVGGAKPNLIKSKVQAVAR
AAHSVGQQPDRTGLRDLAGEIEWSKVTQVRPSDYDKAVAKAGRQSPLPEGEVARVFEAYE
ELCREEHLIDFESVLELTAAMINESPKIAQRVRDQYRYFVVDEFQDVNPLQKLLLDAWLG
DRDDLCVVGDPSQTIYSFTGATPDYLTGFGDRYPHATLVRLVRDYRSTPQVVRVANHVIA
QAKGATSAHHLTLRAQRPDGPDPIYQEYDDEPAEATGVARKISVLLEEGVPAGEIAVLMR
TNSQTAAYEQALGDQGVPFTVRGSERFFERPEIREAVHLLRGARHGAADGEDEPLVRTVR
HLLAPLGLVEQAPEGRRARERWESLSALAQLAEDVAAKAGSAGGRATMAHLVDEIDMRMA
TEHAPGFEGVTLASLHAAKGLEWDAVFLVGLTEGMMPIIYAETDDQVEEERRLFYVGVTR
AREHLVMSWSLARSPGGRKSRKPSRFLDGLRPASPSTPGRRDRRKGGVVRCRVCSDALTD
AVERKLGRCLDCPSTYDEALLERLREWRRLTARDQKVPAYVIFTDATLQAIAEQEPGSVS
RLSAVSGVGSVKLDRYGEAVLALVAGRDPEETVAGDGEEEDE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgaccgcgtcctggagggactggaccccgaacagacccaggcggcacgagcg
cttcgtggccccgtgtgcatcctggcgggtgccggcacgggcaagacccgggcgatcacc
caccggatcgcgcacgccgtggccggtggggtcgtctccgaacagcaggtcctcgcggtc
accttcaccgcccgggccgcgggcgagatgcgcggccgtctccgctcgctcggcgccccc
aaggtgcaggcccgcaccttccactccgcggccctgcgccagctcggcttcttctggggg
gaggccgtcggcggggccaaaccgaacctgatcaagagcaaggtccaggccgtggcccgc
gccgcccactcggtgggccagcagccggaccggaccggtctgcgcgacctcgccggggag
atcgagtggtcgaaggtcacccaggtacggcccagtgactacgacaaggccgtggccaag
gccggtcgccagtcaccgcttcccgagggagaggtcgcgcgggtcttcgaggcctacgag
gagctgtgccgtgaggagcacctcatcgacttcgagtcggtcctcgaactcaccgcggcg
atgatcaacgagagccccaagatcgcccagagggtccgcgaccagtaccgctacttcgtc
gtcgacgagttccaggacgtcaacccgctccagaagctcctcctggacgcctggctgggc
gaccgcgacgacctgtgcgtggtcggcgaccccagccagaccatctactccttcaccggg
gccacccccgactacctgaccggtttcggcgaccggtacccgcacgccaccctggtgcgg
ctggtccgcgactaccgttcgaccccccaggtggtgcgtgtggccaaccacgtcatcgcc
caggccaagggggcgacctcggcgcaccacctcaccctccgggcccagcggccggacggt
ccggacccgatctaccaggagtacgacgacgagccggccgaggccaccggtgtcgcccgc
aagatcagcgtcctgttggaggagggggtgcccgccggggagatcgcggtgctgatgcgc
accaactcccagacggccgcctacgaacaggccctcggcgaccagggcgttcccttcacc
gtgcgcggcagcgagcggttcttcgaacgccccgagatccgcgaggccgtgcacctgctg
cggggggcacgccacggcgcggccgacggggaggacgagcccctcgtccggacggtgcgt
cacctgctcgcccccctcgggctggtcgagcaggccccggagggacgtcgggcgcgggaa
cgctgggagtcgctgtcggcgctggcccagctggcggaggacgtcgccgccaaggccggc
tccgcggggggcagggccaccatggcccacctcgtcgacgagatcgacatgcgcatggcc
accgaacacgcgcccggtttcgagggggtcaccctcgcctccctgcacgcggccaagggc
ctggagtgggacgcggtgttcctcgtcgggctcaccgagggcatgatgcccatcatctac
gccgagaccgacgaccaggtggaggaggagcgtcggctcttctacgtcggggtgacccgg
gcccgcgagcacctggtgatgtcctggtccctggcccgctctcccggtggacgcaagtcc
cgcaagccctcgcgcttcctcgacggactgcgccccgcctcgcccagcaccccgggccgc
cgcgaccggcgcaagggcggcgtcgtgcgctgccgggtgtgctccgacgcgctcaccgac
gccgtcgaacgcaagttgggccgctgcctggactgcccctccacctacgacgaggcgctg
ctggaacgcctgcgcgaatggcgacggctgaccgcgcgggatcagaaggtgcccgcctac
gtgatcttcaccgacgcgaccctccaggccatcgccgagcaggagccggggagcgtgtcc
cggctgtccgccgtgtccggggtcgggtcggtcaaactggatcgttacggtgaggcggtg
ctcgcgctcgtggcgggccgcgacccggaggagacggtcgccggtgacggagaggaagag
gatgagtga
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