Nocardiopsis alba: B005_1214
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Entry
B005_1214 CDS
T02218
Name
(GenBank) periplasmic binding domain protein
KO
K10439
ribose transport system substrate-binding protein
Organism
nal
Nocardiopsis alba
Pathway
nal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B005_1214
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
B005_1214
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nal02000
]
B005_1214
Transporters [BR:
nal02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
B005_1214
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AFR10770
UniProt:
J7LH10
LinkDB
All DBs
Position
1269595..1270803
Genome browser
AA seq
402 aa
AA seq
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MRLPPAFLAGAAGLTLLLTACTTDAPEGADGAGGENGAATTPDAEWFDQAEFDAQLAQRE
ITPEGPDDEPWAQAIEPEWIDTAEFAIDDPENAQVCFSNASVSNPWRVTGSITMRQQAEA
LIEEGRIGGFSSSDAADDDNQQISDIQAFVDSGNCDAIIISPSTTATLTPAVETACESGV
PVIVFDRGVNSDCMVTFIHPIGGYAYGADAAEFLVENLEPGSTVLALRILPGVDVLEHRW
AAAQQVFGDSDLELLGFEFTEGDGAQIKDLVSQHLQRGEVDGIWMDAGDGAVAGLEAFED
AGRPYPVIAGEDELSFMRKWDEEGLTAIAPVYSNFQWRTPMIAAGMILAGEEVPAEWILP
QEPIRQDELDDYLERNSEMPSLHYAKFGGEDLPGFPEAWVDR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctaccccccgcgttcctcgccggcgccgccggcctgaccctgctgctcaccgcc
tgtacgaccgacgcccccgagggggcggacggcgccggcggagagaacggcgccgccacg
accccggacgccgagtggttcgaccaggccgagttcgacgcgcagctcgcccagcgcgag
atcacccccgagggtccggacgacgagccctgggcccaggcgatcgagcccgaatggatc
gacaccgccgagttcgccatcgacgatcccgagaacgcccaggtctgcttctccaacgcc
tcggtgtccaacccctggcgggtcaccggctccatcaccatgcgccaacaggcggaggcg
ctgatcgaggaggggcggatcggcggtttctcctcctccgacgcggccgacgacgacaac
cagcagatctccgacatccaggcgttcgtggactccgggaactgcgacgccatcatcatc
tccccctccaccacggccacgctgaccccggcggtggagaccgcctgcgagagcggggtc
ccggtgatcgtcttcgaccggggcgtgaacagcgactgcatggtcacgttcatccacccg
atcggcggctacgcctacggggccgacgccgccgagttcctggtcgagaacctggagccg
gggtcgaccgtcctggcgctgcgcatcctgcccggtgtggacgtgctcgaacaccgttgg
gccgcggcccaacaggtcttcggcgacagcgacctggagctgctcggtttcgagttcacc
gagggcgacggggcccagatcaaggatctggtctcccagcacctgcaacgaggcgaggtc
gacggcatctggatggacgccggggacggggccgtcgcgggcctggaggccttcgaggac
gccggccgcccctatccggtgatcgccggcgaggacgaactcagcttcatgcgcaagtgg
gacgaggaggggctgacggcgatcgccccggtgtactccaacttccagtggcgcaccccg
atgatcgcggcgggcatgatcctcgcgggcgaggaggtcccggccgagtggatcctgccg
caggagcctatccgtcaggacgagctcgacgactacctggagcgcaactccgagatgccc
tccctgcactacgcgaagttcggcggcgaggacctgcccggcttccccgaggcgtgggtg
gaccggtag
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