Nocardiopsis alba: B005_1282
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Entry
B005_1282 CDS
T02218
Name
(GenBank) radical SAM superfamily protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
nal
Nocardiopsis alba
Pathway
nal00860
Porphyrin metabolism
nal01100
Metabolic pathways
nal01110
Biosynthesis of secondary metabolites
nal01240
Biosynthesis of cofactors
Module
nal_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
B005_1282
Enzymes [BR:
nal01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
B005_1282
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
NLS_NINJA_AFP
Motif
Other DBs
NCBI-ProteinID:
AFR08712
UniProt:
J7LDW2
LinkDB
All DBs
Position
1333398..1334732
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AA seq
444 aa
AA seq
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MTEPVRPDSPYRSYVYAYPHKTAYRPFEERPRLADLWRDEEIGALSLYAHIPFCEMRCGF
CNLFTRSTPPAEQVTAYLDAMERQAEAVASGLPEGAAFARAALGGGTPTYLTADELARTY
AIIESAFGVDLKRIPMSVETSPATATPDRLRVLESLGVTRISMGVQSFLDPEAHAAGRPQ
KRAEVDLALAAIREHTRADLNVDLIYGIERQTPDTWRYSLDTALSWRPEEVYLYPLYVRP
LTGLGRRARAWDDHRLSLYRQGRDHLRERGYEQVSMRMFRRVDAPTTALPDHSCQTDGMV
GLGCGARSYTRGTHYSFDYAVGIGKVRSIIEDYVGRDTEDFTRAEVGFHLDEEERRRRHV
LQSLLRVEGLDVAAYTERFGSHPAADLPTEFAALNARGWLVPGEDSVDSRTLRLTEEGLA
HSDAIGPDLFSARVNRLMDEYEAG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcccgtgcgcccggactccccgtaccgctcgtacgtgtacgcctatccgcac
aagacggcctatcgcccgttcgaggaacggccgcgcctggccgacctgtggcgggacgag
gagatcggcgcgctgtcgctgtacgcgcacatccccttctgcgagatgcgctgcggcttc
tgcaacctgttcacccgttccaccccgccggccgaacaggtcaccgcctacctcgacgcc
atggagcggcaggccgaggccgtcgcctccggcctgccggagggcgccgccttcgcccgc
gcggccctgggcggcggtacccccacctacctgaccgccgacgagctggcgcggacctac
gccatcatcgaatcggccttcggggtggacctgaagcggatcccgatgtccgtggagacc
tcaccggccaccgcgaccccggatcggctccgggtcctggagtcgctcggcgtcacccgg
atcagcatgggggtgcagagcttcctcgaccccgaggcgcacgccgccggccgtccgcag
aagcgcgcggaggtggacctcgccctggccgccatccgcgagcacacccgcgccgacctc
aacgtggacctcatctacggcatcgagcggcagaccccggacacctggaggtactcgctg
gacacggcgctgtcgtggcgaccggaggaggtctacctctacccgctctacgtgcgcccg
ctcaccggtctgggtcgtcgcgcccgcgcctgggacgaccaccgtctgtccctgtaccgc
cagggccgggaccatctgcgcgagcgcggatacgagcaggtgtccatgcggatgttccgt
cgggtggacgcaccgacgacggccctccccgaccattcctgtcagaccgacggcatggtg
ggtctgggctgtggtgcccgctcctacacccgcggcacccactactccttcgactacgcg
gtggggatcgggaaggtgcggtcgatcatcgaggactacgtcggccgggacaccgaggac
ttcacccgggccgaggtggggttccacctggacgaggaggaacgtcgccgccgccacgtg
ctccagtcgctgttgcgggtggaggggttggacgtggccgcctacacggagcggttcggc
tcccacccggccgccgacctgcccaccgagttcgccgccctgaacgcccggggatggctg
gtccccggggaggactccgtcgactccagaacgctccgtctcaccgaggaggggctggcc
cactccgacgcgatcggaccggacctgttctccgcgcgggtgaaccggctcatggacgag
tacgaggccgggtga
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