Nocardiopsis alba: B005_1731
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Entry
B005_1731 CDS
T02218
Symbol
choW
Name
(GenBank) choline ABC transporter, permease protein
KO
K02001
glycine betaine/proline transport system permease protein
Organism
nal
Nocardiopsis alba
Pathway
nal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B005_1731 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nal02000
]
B005_1731 (choW)
Transporters [BR:
nal02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
B005_1731 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
PC_rep
Motif
Other DBs
NCBI-ProteinID:
AFR10527
UniProt:
J7LIQ7
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All DBs
Position
complement(1805420..1807381)
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AA seq
653 aa
AA seq
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MATVTEPAGTKEAGTENTGDGDGGLLRRSWFQALLVVVVLILGYQLTRLMGSPSWAGGFP
GATGSAFMAWLDGVYAWIVANRNDSPLFLYFFNYISVGLGSAVVLINQVLNTFTWLGVTV
IGVLASWRVAGWRVALLVLATFAVFALTGLWNESMTTLSLIITSVFIALLFGIPLGILAG
RSEGFYRAIRPVLDFMQIMPAFAYLLPFVLLFGIGNASAAVVTAVYALPPVVRITALGIR
EVNKGAIEATTSLGSTPWQILTKVQLPLAKRTILLGVNQTIMLAVSMVVIASVIGAGGLG
DAIYQALSKINVGQAFQAGLAIVMLAIAMDRVTGAVGHGAHTPRIEARYRLPLLGGMLAA
AVAAMIVGRLLDLGGWPRDLSLRIDIPVNAFDKAIEAAIGPAAAALGSWTQSWILGPLDN
LLSGSPWWLVTLAAAALGLIFAGRRVAVISALCFIAIGLLGVWDNAMATLSQVLVATVVT
IALGVVLGVLMSRNDVVAVVFRPVLDFMQTLPPFVYLIPAVALLGLGPVPALAAAVIFAL
PPVIRLVNDGIRGVPEGTLEAAVSQGSTKWQLLTKVELPMARGSLLLAVNQGIILVLSMV
VMGALVGAGALGNDVVLGLAQNELGLGIAAGLAIVFLGLFLDRVTQGRRAPRA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggccacggtgaccgaacccgccggcaccaaggaggccggcacggagaacacgggggac
ggcgacggcgggcttctgcgcaggagctggttccaggccctgctggtggtcgtggtgctg
atcctgggctaccagctgacccgcctgatgggctccccgtcctgggcgggcggcttcccg
ggcgccaccggcagcgccttcatggcctggctcgatggtgtctacgcctggatcgtcgcc
aaccgcaacgacagcccgctgttcctctacttcttcaactacatctccgtgggcctcggg
tcggccgtcgtgctgatcaaccaggtcctgaacacgttcacctggctcggcgtgaccgtc
atcggcgtgctcgcctcctggcgggtcgcgggatggcgggtggccctgctggtcctcgcc
accttcgcggtgttcgcgctgaccgggctgtggaacgagtcgatgacgacgttgtcgctc
atcatcacctcggtgttcatcgccctgctgttcggtatcccgctcggcatcctggccggt
cggagcgaggggttctaccgggcgatccgtccggtgctggacttcatgcagatcatgccg
gccttcgcctacctgctgccgttcgtgctgctcttcggcatcggtaacgcgtcggccgcc
gtggtgaccgccgtctacgcgctcccgccggtcgtacggatcaccgcgttgggcatccgc
gaggtgaacaagggcgccatcgaggcgacgacctcgttgggctccaccccgtggcagatc
ctcaccaaggtgcagctgccgctggccaagcgcaccatcctgttgggcgtcaaccagacc
atcatgctcgcggtctccatggtcgtcatcgcctcggtcatcggagcgggcggtctcggc
gacgccatctatcaggcgctgtccaagatcaacgtcggtcaggcgttccaggcgggtctg
gcgatcgtcatgctcgccatcgccatggatcgggtcaccggcgcggtcggccacggagcg
cacacaccgcggatcgaagcacgttatcggctgccgctcctgggcggcatgctcgccgcg
gccgtcgcggcgatgatcgtgggccgtctcctcgacctgggaggttggccgcgcgacctg
tcgctccggatcgacatcccggtgaacgccttcgacaaggcgatcgaggcggcgatcggt
ccggccgccgccgctctgggctcctggacacagagctggatcctcggaccgctcgacaac
ctgctcagcggatcgccgtggtggttggtgacgctcgccgccgccgcgctcgggctgatc
ttcgcgggcaggcgggtcgcggtgatctccgcgctctgtttcatcgcgatcggcctcctg
ggtgtgtgggacaacgccatggccacgctctcccaggtgctggtggccacggtggtcacc
atcgcgctgggcgtggtcctcggtgtcctgatgtcgcgcaacgacgtggtcgccgtggtg
ttccgccccgtgctcgacttcatgcagaccctgccgccgttcgtctacctgatcccggcg
gtggccctgctcggactgggccccgtgcccgccctggcggccgcggtcatcttcgccctg
cccccggtgatcaggttggtgaacgacggtatccgcggggtgcccgagggcaccctcgaa
gccgccgtctcccagggctccacgaagtggcagctgctcaccaaggtggagctgcccatg
gcgcgcggctccctgctgttggcggtcaaccagggcatcatcctggtcctgtccatggtg
gtgatgggcgccctggtcggcgccggcgcgctcggtaacgacgtcgtcctcgggctggcg
cagaacgagctgggcctgggtatcgccgcgggcctggcgatcgtgttcctgggtctgttc
ctggaccgggtgacgcagggaaggagggcaccccgtgcctag
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