Nocardiopsis alba: B005_1778
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Entry
B005_1778 CDS
T02218
Name
(GenBank) ompA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
nal
Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nal02000
]
B005_1778
Transporters [BR:
nal02000
]
Other transporters
Pores ion channels [TC:
1
]
B005_1778
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
AFR10531
UniProt:
J7LCY2
LinkDB
All DBs
Position
complement(1849929..1851521)
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AA seq
530 aa
AA seq
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MARKTPLTVVALMVSGSLLLSGCTVVSDWWSETFGEASGPPEVKEEFPYVREGRIFQDTG
QDAEMRFAITGLERTDDYTVMHYEVSYPDDFSGPNRNLSMAHTLVDPLTGRVYRQFLDDE
GLKYGSESPNEDGLYPVHDGVTNEYTRYFPRLPDEVSQVTFVGSGLGAMTGIPVQDVENE
REDPEDPNGPKHLTLDDPPPRGENLTFANRRPDEDAVADEGWVQSFVDSEIASTTRDGDR
EIISLHSDVMFEFDRSDLTADAADVVRRAATTLARNVDPDDPTITVVGHTDGIGNDSYND
NLSVERAESVRDLLAEELGTDYKLEVEGRGKREPIAREGGPDDEEARARNRRVEFSYVFD
PTVEATEDEEYDDDGLGVAQRNVTWPAPYSDDPGSVVADGEKDGIRLEIYPLRRDGAYVI
GTVAMTNTTDEPLAPELGGSETVAGGPEQFNKGTLGGFQLFEPESGLVRYVAQMDFGENR
YSSFAEEVHTIQPGNTHELVAVFPAPPVDVEELTLRAGPFGEFEEIPVEY
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagacgcccctcaccgtggtcgcgctcatggtctcgggcagcctcctgctc
agcggctgcaccgtcgtgtccgactggtggtccgagaccttcggagaagcgtccggcccg
cccgaggtcaaggaggagttcccctacgttcgtgagggacgcatcttccaggacaccggc
caggacgccgaaatgcgtttcgccatcaccggcctggagcgcaccgacgactacacggtc
atgcactacgaggtctcctacccggacgacttctccggacccaaccggaacctgagcatg
gcgcacacgctggtcgaccccctgaccggtcgcgtgtaccggcagttcctcgacgacgag
ggcctcaagtacggctcggagagccccaacgaggacggcctgtaccccgtgcacgacggg
gtcaccaacgagtacacccgctacttcccccgactgcccgacgaggtgtcccaggtgacc
ttcgtcggcagcggtctgggcgccatgaccggcatcccggtccaggacgtggagaacgag
cgcgaggatccggaggaccccaacgggccgaagcacctcacgctcgacgacccgcccccg
cgaggcgagaacctcaccttcgccaaccgtcggcccgacgaggacgcggtcgccgacgag
ggttgggtgcagagcttcgtcgactccgagatcgcctcgaccacccgtgacggggatcgg
gagatcatctccctgcactccgacgtgatgttcgagttcgaccgctcggatctgaccgcc
gacgccgcggacgtggtccggcgcgccgccaccacgctggcccgcaacgtcgaccccgac
gaccccacgatcaccgtggtcggtcacaccgacggcatcggaaacgactcctacaacgac
aacctgtcggtggagcgcgccgagagcgtgcgcgacctgctcgcggaggagctcggcacc
gactacaagctggaggtcgaggggcgcggcaagcgcgagcccatcgcccgcgagggcggc
cccgacgacgaggaggcccgcgcccgtaaccgtcgggtggagttctcctacgtcttcgac
ccgacggtcgaggccaccgaggatgaggagtacgacgacgacggtctgggcgtggcccag
cgcaacgtcacctggcccgctccttacagcgacgacccgggttccgtggtcgccgatggt
gagaaggacggcatccggctggagatctacccgctccgtcgggacggcgcctacgtcatc
ggcaccgtggcgatgaccaacaccaccgatgagccgctcgcccccgagctgggcggcagc
gagacggtggcgggcggtcccgagcagttcaacaagggcaccctgggcggcttccagctg
ttcgagccggagagcggcctggtccgttacgtggcccagatggacttcggcgagaaccgc
tacagcagcttcgccgaggaggtgcacacgatccagcccggcaacacccacgagctggtc
gccgtcttcccggcgcccccggtggacgtcgaggagctgacgctgcgcgccggaccgttc
ggcgagttcgaggagatcccggtcgagtactag
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