Nocardiopsis alba: B005_2581
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Entry
B005_2581 CDS
T02218
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
nal
Nocardiopsis alba
Pathway
nal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B005_2581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nal03400
]
B005_2581
Enzymes [BR:
nal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
B005_2581
DNA repair and recombination proteins [BR:
nal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B005_2581
Prokaryotic type
B005_2581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AFR06752
UniProt:
J7L8F4
LinkDB
All DBs
Position
complement(2692160..2693035)
Genome browser
AA seq
291 aa
AA seq
DB search
MSDNPYSTAVLAWYETNARDLPWRHPDASPWSILVSEIMLQQTPVVRVLPAWQAWMERWP
TPSHLAEEPSGEAVRMWNRLGYPRRALRLHACAVAITEEHGGEVPDDHATLLSLPGIGAY
TAAAVASFAFGQRHAILDTNVRRVLARAETGIEYPPKTQTKAETALAESLLPSEPSVAAR
WGVAVMELGALVCTARSPRCVDCPIAGQCAWRIAGKPPHDGPPRRGQTYAGTDRQVRGKL
LAVLRDSREPVVKSALDAVWDDHIQRERALDALVSDGLVDPLDDGRYALPA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataacccttacagcaccgcggttctggcgtggtacgagaccaacgcccgagac
ctcccctggcgtcacccggacgcctcgccctggtccatcctggtcagcgagatcatgctc
cagcagactcccgtcgtacgggtactgcccgcgtggcaggcctggatggaacgctggccc
accccctcccacctggccgaagagccttccggcgaggcggtccgcatgtggaaccggctg
ggctacccccgcagggccctccgtctgcacgcctgcgccgtcgccatcaccgaggaacac
ggcggagaggttccggacgatcacgcgacccttctgtcactccccggaatcggcgcctac
acggcggcggcggtggcgagtttcgccttcggacaacggcacgccattttggacacgaac
gtgcgtcgtgttctagcccgtgccgaaaccggaatcgagtacccaccgaaaacccagacg
aaggcggagaccgcgctggccgagtccctgctgccctcggaaccgtccgtggcggcccgt
tggggcgtggccgtgatggaactgggcgccctggtgtgcaccgcccggtccccgcgctgc
gtggactgtccgatcgccggacagtgcgcctggcggatcgcgggcaagccgccgcacgac
ggcccgccgcgtcgaggacagacctacgcgggcaccgaccgtcaggtgcggggaaagctg
ctggcggtcctgcgcgattcacgcgagccggtggtcaagtccgcgctggacgccgtctgg
gacgaccacatccagcgtgagcgggctctggacgccctggtctccgacggcctggtcgac
cccctggacgacggccgctacgccctccccgcctga
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