Nocardiopsis alba: B005_2689
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Entry
B005_2689 CDS
T02218
Name
(GenBank) bacteriocin biosynthesis docking scaffold, SagD family domain protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
nal
Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nal03009
]
B005_2689
Ribosome biogenesis [BR:
nal03009
]
Prokaryotic type
ribosomal protein modification factors
B005_2689
SSDB
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Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
AFR08152
LinkDB
All DBs
Position
2808033..2809379
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AA seq
448 aa
AA seq
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MNPDQATIDPLTELRRVTALLSPYGLVSGSLALPRPEGEPGFEVHAASLGDPSKVLDNLR
GWNRGADMGNMNGAGSALTPERARLVSLAESLERYSTCAWDEGGLTVASESELDVEYVSP
SRWPRCSAEELRSEHCGLREYDPTLPIRWVRGWSLTRRREVLVPAQAVYMHMPERSPSER
FTRGITTGSAVHTDLRSAVLGGLLEVVERDSISLVWLRRLRLPELSVDAGLMDPIDGDHV
REGASGPFDVRFFDATTDFGVPVVYALQLSDVDERIAQVVCATCESDPGRAVAKIYRELA
SLRVAVRAHAAGNPVVRPEPGEVSVAGGAAYNADISRRRVFDFLLRGERERRHIATMPGA
LDKDDPLGDAVERLADRGAEVLAVDITTDEARQVGMHAVKVVVPEAMPLSFIHAERYLAT
ERLRTAPRAMGVESHGPEFVNPEPQPFA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgaccaggcgacgatcgacccccttacggagctgcgccgtgtcacggccctg
ctctccccttacgggctggtgtccgggagcctcgcgctgccccgacccgagggagaaccc
ggcttcgaggtccacgccgcgagcctcggtgatccctcgaaggtcttggacaacctccgt
ggctggaaccgcggggccgacatgggcaacatgaacggtgcgggcagcgctctcaccccc
gaacgcgctcgactcgtctcgctcgccgagtccctcgaacgctactcgacgtgtgcctgg
gacgagggcggactgacggtcgcgtccgagtccgagctcgacgtggaatacgtgtccccg
tctcgctggcctcgctgctccgccgaggaactacggagcgagcactgcggcctgcgcgag
tacgacccgaccctgccgatccgatgggtacgcggatggtcgctcactaggcggcgcgag
gtcctcgtcccggctcaggcggtgtacatgcacatgcccgagcgctcgccgtcggagcgc
ttcacccgagggatcacgaccggatcggcggtgcacaccgacctcagatccgccgtcctg
ggtggactgctcgaagtggtcgaacgcgattcgatctccctggtgtggctgcggcgactg
cgtctcccggagttgtcggtggatgccgggctcatggatcccatcgacggcgatcatgtt
cgggagggggcctccggccctttcgacgtccggttcttcgacgccacgacggactttggt
gtcccggtcgtctacgcgttgcagctgtccgacgtcgacgaaaggatcgcgcaggtcgtg
tgcgccacgtgtgagagcgatccgggaagggcggtggccaagatctaccgggagctggcc
tccctgcgggtggcggtgcgtgctcacgccgccggaaaccccgtggtcaggcccgagccc
ggagaggtgagtgtggccggaggcgccgcctataacgccgatatctcgcgccgccgcgtg
ttcgacttcctcctgcggggggagcgggagagacgccatatcgccacgatgccaggggcc
ttggacaaggacgatccgctcggtgacgcggtcgagcgcttggccgaccggggcgccgag
gttctcgctgtggacatcaccaccgacgaggccagacaggtcgggatgcacgcggtcaag
gtggtggtgcccgaggccatgccgctctccttcatccacgccgagcgctacctggccacc
gagcgactgcgcacggcgcctcgggccatgggagtcgagagccacggtccggagttcgtc
aatcccgagccacagccattcgcgtaa
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