Nocardiopsis alba: B005_3064
Help
Entry
B005_3064 CDS
T02218
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
nal
Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nal03036
]
B005_3064 (smc)
Chromosome and associated proteins [BR:
nal03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
B005_3064 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AFR07046
UniProt:
J7L2V0
LinkDB
All DBs
Position
3187008..3190556
Genome browser
AA seq
1182 aa
AA seq
DB search
MYLKNLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK
MEDVIFAGTSTRQALGRAEVSLTIDNTDGALPIDYTEVTIKRTMFRNGGSEYAINGDTCR
LLDIQDLLSDSGIGREMHVIVGQGQLDTVLHAGPEERRALIEEAAGILKHRKRKERAIRK
LNAMQGNLDRVTDLTAELRRQLKPLGRQAELARKAAVIQADLRDARLRLLADDIVTLTEQ
LAKEEADEKEVLQRRGAAEAALEQAQGREAELEAQATAAAPALARAGDTYHALSRLTERL
DAVRGLATERHQNLVAVQGEIIRRRDPEELEMEAEEVAAQEEELQAGLEEAREILETGVT
ERAAAEDALRREERRLEAASRAAAERREGIVRLAARVESLRGRVASHETEITRLEESARQ
AAERATTAQTEYEMAAEEAAGLDEGDAELDQTQELYARRLSAADVELDRLRGEERAAEGE
RAALAARKEALELGLAHKDGAGTLLEAGLPGMLGGLAALVQVDSGHETAVAAAFGVAAGA
VAVRDHDSAMAALELLKTEDAGRAGIVVARAVPSLDRASWPEVPSGVRYAADAVQAPEHL
ADAVAALLDRVALVPDTRSALELVEALPGVRAVTPEGDVFATEMVHGGTAAAPSLLEVQA
AVDEAAERLEAATENAKRVAAELETARRERAEVATAAEELTARRRQSDRARNQAAQRLGK
LAGQARSAEAESERYAAAAVKAAAARGEDGERLERLEEELAEAEEIAAAVEEEAPDADHR
EELSALAEQARATEMERRLAVRTAEERARSMAGRAEALRAQAAEERRAVEREAERRRRRA
AQATVARAVAESAGLALERIALSLAAAETERSAAEAEREARDGELKTVRARVRELSVELE
KLTSSAHSGEMARAERRLRLEQLETKALEELGVDVPTLIAEYGPRVPVPPPVDAGEDAVP
LPYVREVQAKRLKTAERQLNQLGKINPLALEEFAALEERHAFLNAQLEDLKKTRRDLMDI
VAEVDARVQEVFSSAYLDVEREFAAIFGRLFPGGEGKLVLTTPEDMLTTGIEVEARPPGK
KVKRLSLLSGGERSLTAVAFLAAIFKARPSPFYVMDEVEAALDDTNLQRLLVIFEELRAS
SQLIVITHQKRTMEAADALYGVTMQGDGISQVISQKLERPAS
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctgaagaatctgacgttgcgcggcttcaagtcgttcgcgtcggccaccaccctt
cgtttcgagcccggcatcacctgtgtggtggggcccaacggctcgggcaagtccaacgtc
gtcgacgccctgtcctgggtgatgggcgaacagggcgccaagtccctgcgcggcggcaag
atggaggacgtgatcttcgcgggcacctccacccgccaggcgttgggccgcgccgaggtc
agtctcaccatcgacaacaccgacggcgccctgccgatcgactacaccgaggtcaccatc
aagcggacgatgttccgcaacggcggctccgagtacgcgatcaacggcgacacctgccgt
ctgttggacatccaggacctgctcagcgactccggcatcggccgggagatgcacgtcatc
gtcggtcagggccagttggacaccgtcctgcacgcgggtcccgaagagcgccgcgccctc
atcgaggaggccgcgggcatcctcaagcaccgcaagcgcaaagagcgggcgatccgcaag
ctcaacgcgatgcagggcaacctcgaccgggtcaccgacctgaccgccgagctgcgtcgt
cagctcaaacccctgggccgccaggccgaactggcccgtaaggccgccgtcatccaggcc
gacctgcgcgacgcccgtctgcggctgctcgccgacgacatcgtcaccctcaccgaacag
ctcgccaaggaggaggccgacgagaaggaggtcctccagcggcgcggggccgccgaggcc
gccctcgaacaggcccaagggcgcgaggccgagctggaggcgcaggccaccgcggccgcg
cccgctctggccagggccggcgacacctaccacgcgctctcccgcctcaccgaacgtctg
gacgccgtacgcggcctggccaccgaacggcaccagaacctcgtcgccgtgcagggcgag
atcatccgccgccgggatcccgaagaactggagatggaggccgaggaggtcgccgcccag
gaggaggagctccaggcggggctggaggaggcccgcgagatcctggagaccggtgtcacc
gagcgtgccgccgccgaggacgccctgcgccgtgaggagcggcgcctggaggcggcctcg
agggccgccgccgaacgccgagagggcatcgtccggctcgccgcgagggtggagagtctg
cgcggacgcgtggcctcccacgagaccgagatcacccggctggaggagtcggcccgccag
gccgccgaacgcgcgaccaccgcccagaccgagtacgagatggccgccgaggaggccgcc
ggtctcgatgagggcgacgccgaactcgaccagacccaggagctgtacgcacgacgtctg
tccgccgccgacgtcgaactcgaccgtctccgcggagaggaacgcgccgccgagggcgag
cgcgccgccctggcggcccgtaaggaggccctggaactggggctggcgcacaaggacggt
gccggcacgctcctggaagcggggctgcccggcatgctcggcggtctggccgccctcgtc
caggtcgactccggacacgagaccgccgtcgcggccgccttcggggtggccgccggagcc
gtggccgtccgagaccacgacagcgccatggccgccctggaactcctcaagaccgaggac
gcgggccgggccggcatcgtggtggcccgggcggtcccctcgctcgaccgtgcctcctgg
ccggaggtgccctcgggagtgcgctacgccgccgacgcggtccaggcccccgagcacctg
gccgacgccgtcgccgccctgttggaccgggtggccctggttccggacacccggagcgcg
ctcgaactggtcgaggccctgccgggcgtacgagccgtcacccccgagggcgacgtgttc
gccaccgagatggtccacggcggaaccgccgccgcgcccagcctcctggaggtccaggcc
gcggtggacgaggccgccgaacggctggaggccgccaccgagaacgccaagcgggtggcg
gccgagctggagaccgcccgccgggaacgggccgaggtcgccaccgccgccgaggagctc
accgcccgacgccgtcagagcgaccgcgcgcgcaaccaggcggcccagcgcctgggcaag
ctcgccggtcaggcccgatcggcggaggccgagtccgagcgctacgcggccgccgccgtc
aaggccgccgccgcgcgcggcgaggacggcgagcggctggagcggttggaggaggagctg
gccgaggcggaggagatcgccgcggccgtcgaagaggaggctcccgacgccgaccaccgt
gaggaactgtcggctctggcggaacaggcccgcgccaccgagatggagcgccgactggcg
gtgcgcaccgccgaggagcgcgcgcgttcgatggcgggccgggccgaggcgctgcgggcc
caggcggccgaggaacgtcgggccgtggagcgtgaggcggagcgccgtcgtcggcgcgcg
gcccaggccaccgtcgcccgggccgtcgcggagagcgccggtctcgccttggagcggatc
gcgctctccctggccgccgccgagaccgagcgctccgccgccgaggccgaacgcgaggcc
cgggacggcgaactgaagaccgtgcgcgcccgagtacgcgaactctccgtcgaactggag
aagctcaccagttccgcgcacagtggcgagatggcccgggcggagcgcaggctgcgcctg
gaacaactggagaccaaggccttggaggagctgggcgtggacgtgcccaccctcatcgcc
gagtacggcccccgcgtcccggtgccgccgccggtggacgcgggcgaggacgcggtcccg
ctgccgtacgtgcgcgaggtgcaggccaagcggctcaagaccgccgaacgtcagctcaac
cagttgggcaagatcaaccccctggcgttggaggagttcgccgctctggaggaacggcac
gccttcctcaacgcccagttggaggacctgaagaagacccgacgcgacctgatggacatc
gtcgccgaggtcgacgcccgggtgcaggaggtcttctcctccgcctacctggacgtggaa
cgcgagttcgcggcgatcttcggccgtctgttccccggtggcgaggggaagctggtgctg
accacccccgaggacatgctgaccaccggtatcgaggtcgaggcccggcccccgggcaag
aaggtcaagcggctgtcactgctgtccggtggcgagcgctcgttgacggcggtggccttc
ctcgcggcgatcttcaaggcgcggccctcgccgttctacgtcatggacgaggtcgaggcg
gccctggacgacaccaacctccagcgtctgctggtgatcttcgaggaactgcgggcctcg
tcccagctcatcgtgatcacccaccagaagcgcacgatggaggcggcggacgccctgtac
ggcgtgacgatgcagggtgacggcatctcccaggtgatcagccagaagctcgaacgcccc
gcttcgtag
DBGET
integrated database retrieval system
