Nocardiopsis alba: B005_3333
Help
Entry
B005_3333 CDS
T02218
Symbol
choD
Name
(GenBank) cholesterol oxidase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
nal
Nocardiopsis alba
Pathway
nal00984
Steroid degradation
nal01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
B005_3333 (choD)
Enzymes [BR:
nal01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
B005_3333 (choD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
DAO
GMC_oxred_N
FAD_binding_2
Pyr_redox_2
NAD_binding_8
Fer4_9
FAD_binding_3
Fer4_10
GIDA
HI0933_like
Fer4_6
Pyr_redox
Fer4
Motif
Other DBs
NCBI-ProteinID:
AFR08641
UniProt:
J7L7I4
LinkDB
All DBs
Position
complement(3467304..3469163)
Genome browser
AA seq
619 aa
AA seq
DB search
MPPQSTEAPADRYASDDDFDYDVVVIGSGFGGSVSALRLTEKGYRVGVLEAGRRFTPETL
PSSSWDLRNFLWAPKAGMYGIQRIHLLRDVMILAGAGVGGGSLNYANTLYHPMDPFFEDP
QWRHITDWKTELAPFYDQARRMLGVRTNPTMTPSDVHLKAVAEDMGVGDTFRLTPVGVCF
GDGRDGEGNKAAPGESVGDPYFGGAGPERRACTECGECMTGCRHGAKNTLTENYLYFAER
GGAEIHPLTTVERLRVRPDAEGGGFAVDTLRTDAPRRRENARTFTARQVVVAAGTYNTQD
LLHRMRDDGLLPRLSSRLGTLTRTNSEALVGAMSKQVPPPEDLTHGVAITSSIHPDENTH
IEPVRYGKGSNAMGLLTTIQVPGGGRIPRWLRYLGLIARNPYVFARSLSNRRWSERIIIG
LVMQSLDNSLTTSVKRGPFGGRKRLTSRQGHGEPNPTWIPAGQEAATRLAERIDGYPGGT
IGDPFNIPMTAHFLGGCPIGDGPDTGVIDPYHRLYGYPGLHVVDGSAVTANLGVNPSLTI
TAQAERAMSLWPNKGEKDARPPQGEAYRRVDPVFPHAPAVPAGSFAELRHTGSLPISVVT
KRSSETGGSPVRVEDRPSG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgccccctcagagcacagaggcccccgccgatcgatacgcatcggacgacgacttcgac
tacgacgtcgtcgtgatcgggtcggggttcggcggatcggtgagcgcgctccgcctcacc
gagaagggataccgcgtcggtgtcctggaggccggacgccgtttcacccccgagaccctg
ccctcgtcctcctgggacctgaggaacttcctctgggccccgaaggccggcatgtacggg
atccagcgcatccacctgctgcgcgacgtgatgatcctggccggggccggggtgggaggt
ggttcgctcaactacgcgaacaccctgtaccacccgatggaccccttcttcgaagacccc
cagtggcggcacatcaccgactggaagacggagctggcccccttctacgaccaggcccgc
cgcatgctcggcgtgcgcaccaaccccaccatgaccccctccgacgtccatctaaaggcg
gtcgccgaggacatgggcgtcggtgacaccttccggctgaccccggtgggcgtgtgcttc
ggcgacggacgggacggggaggggaacaaggccgcccccggcgagtccgtgggggacccc
tacttcggcggcgcgggccccgagcgcagggcctgcaccgaatgcggtgagtgcatgacc
ggctgccggcacggcgccaagaacaccctcaccgagaactacctgtacttcgccgaacgc
gggggcgccgagatccaccccctgaccacggtggaacggctccgggtccgccccgacgcc
gagggcggcggtttcgccgtcgacaccctccgcaccgacgccccgcgacggagggagaac
gcccgcacgttcaccgcccgtcaggtggtggtggccgcgggcacctacaacacgcaggac
ctcctgcaccggatgcgcgacgacggtctgctgccgcgcctgtcctccaggttgggcacc
ctcacccgcaccaactccgaggcgctggtgggggccatgagcaagcaggtgccgccgccc
gaggacctcacccacggcgtcgccatcacctcctccatccaccccgacgagaacacccac
atcgaaccggtgcgctacggcaagggctccaacgcgatggggctgctcaccaccatccag
gtcccgggcggcgggaggatcccgcgctggctccgctacctggggctgatcgcgcgcaac
ccgtacgtgttcgcccgcagcctctccaaccggcgctggtcggagcggatcatcatcggt
ctggtgatgcagtcgttggacaactcgttgaccacctcggtcaagcgcggaccgttcggc
ggccggaaacgactcacctcgcgccagggccacggggagcccaacccgacctggatcccc
gccggccaggaggccgccacgcggctggccgagcggatcgacggctaccccggcggcacc
atcggggacccgttcaacatcccgatgaccgcgcacttcctgggcggctgcccgatcggg
gacggcccggacaccggggtgatcgacccctaccaccggctgtacggatacccggggctg
cacgtggtggacggttcggcggtcaccgccaacctgggggtgaacccgtcgttgacgatc
accgcgcaggccgaacgggcgatgtcgttgtggccgaacaagggcgagaaggacgcccga
ccgccccagggcgaggcgtaccgcagggtcgacccggtcttcccccacgctcccgccgta
ccggccggctccttcgccgaactacggcacaccgggtcgcttccgatctcggtggtcacg
aagcgctcctccgagacgggcgggtcccccgtgcgggtcgaggaccgtccttcggggtga
DBGET
integrated database retrieval system
