Nocardiopsis alba: B005_3475
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Entry
B005_3475 CDS
T02218
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nal
Nocardiopsis alba
Pathway
nal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
B005_3475 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nal03019
]
B005_3475 (orn)
03009 Ribosome biogenesis [BR:
nal03009
]
B005_3475 (orn)
Messenger RNA biogenesis [BR:
nal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B005_3475 (orn)
Ribosome biogenesis [BR:
nal03009
]
Eukaryotic type
Pre-60S particles
RNases
B005_3475 (orn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AFR08867
UniProt:
J7LE99
LinkDB
All DBs
Position
complement(3638312..3638947)
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AA seq
211 aa
AA seq
DB search
MWIDCEMTGLDFENDALIEVACLITDSELNILDEGVDVVIKPPQDALDRMGDFVRDMHTT
SGLLAELDDGVTLQEAEDIVLEHIRRYVSEPGKAPLCGNSIATDRTFLARDMKRIDSHLH
YRMIDVSSIKELLRRWHPRVYYASPEKKGGHRALADITESIQELRYFRAAAFVPEPGPDS
ATARAIAAEIVEGGTGMKARDMALAESAPEK
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgtggatcgactgcgagatgacgggcctcgacttcgagaacgacgcgttgatcgaggtg
gcctgtctgatcaccgacagcgaactcaacatcctcgacgagggtgtcgacgtcgtgatc
aagcctccgcaggacgctctggaccggatgggcgacttcgtccgggacatgcacaccacc
tccgggctgctcgccgagctggacgacggcgtcaccctccaggaggccgaggacatcgtc
ctggagcacatccgccgctatgtgtccgagcccggcaaggcgcccctgtgcggcaactcc
atcgccaccgaccgcaccttcctcgcccgcgacatgaagcggatcgactcccacctccac
taccggatgatcgacgtctcctccatcaaggagctgctgcgccgctggcacccgcgcgtc
tactacgcgagcccggagaagaagggcggccaccgcgccctggccgacatcaccgagagc
atccaggagctgcgctacttccgcgccgccgccttcgtgcccgaacccgggcccgactcg
gccaccgcccgcgcgatcgccgccgagatcgtcgagggcggcaccggcatgaaggcgcgt
gacatggctctcgccgaatccgcccccgaaaaatga
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