Nocardiopsis alba: B005_3547
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Entry
B005_3547 CDS
T02218
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nal
Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nal03009
]
B005_3547 (rimO)
Enzymes [BR:
nal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
B005_3547 (rimO)
Ribosome biogenesis [BR:
nal03009
]
Prokaryotic type
ribosomal protein modification factors
B005_3547 (rimO)
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AFR05934
UniProt:
J7L573
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All DBs
Position
3722588..3724021
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AA seq
477 aa
AA seq
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MSSRRTVSLVTLGCARNEVDSEELAGRLAAGGWDLVDDDTEADVTVVNTCGFIEAAKQDS
IETLLEAASSGGKVVAAGCMAERYGSELADALPEAQVIGFDDYAAITDRLDDVVAGRSLV
PHDPRDRRTLLPISPAERDASQVHVPGHASFADSEGAEGTELPYRTSIPRRRLTGGPVAN
LKIASGCDRRCTFCAIPAFRGAYISRQMDEIVREAEWLASEGVREVFLVSENSTSYGKDL
GDLRALEKLLPRLAAVEGLERVRVSYLQPAEVRPGLVEVLTGTPGVVPYFDLSFQHASGP
LLRRMRRFGDRERFLELLATARAKAPEAGARSNFIVGFPGETEEEFEELVAFLSEARLDA
IGVFGYSDEDGTEAAGHADKVPEEVVQERVDRLNRLAEELMAQRAEERIGDEVTVLVESV
IEDGVYEGRSEHQAPEVDGSTILYGEGLSVGDLVRATVIQAAGADLVAEQDGEAGDR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcgccgtactgtctcactcgtcaccctggggtgtgcgcgtaacgaggtcgac
tccgaagagctcgccggacgccttgccgccggcggctgggacctcgtcgacgacgacacc
gaggccgacgtgaccgtcgtcaacacctgcggattcatcgaggccgccaagcaggactcg
atcgagaccctgctggaggcggcctcgtcgggtggcaaggtggtcgccgccgggtgcatg
gccgaacgttacggctccgaactggccgacgccctccccgaggcccaggtgatcggcttc
gacgactacgcggcgatcaccgatcgtctcgacgacgtcgtcgccggacgttccctggtc
ccgcacgaccctcgcgaccgtcgcaccctcctgccgatcagtccggccgagcgcgacgcc
tcccaggtccacgttcccggccacgcctccttcgccgactccgagggggcggagggcacc
gagctgccctaccgcacctcgatcccgcgccgccggctcaccggcggcccggtcgccaac
ctcaagatcgcctccggctgtgacagaaggtgcaccttctgcgccatcccggccttccgc
ggcgcctacatctcccgccagatggacgagatcgtccgtgaggccgagtggctggcgagc
gagggcgtccgcgaggtcttcctggtcagcgagaactccacctcctacggcaaggacctg
ggcgacctgcgcgctctggagaagctgctgccgaggctggccgctgtcgaggggctggag
cgcgtgcgcgtcagctacctccagcccgccgaggtccgtccggggctggtcgaggtgctc
accggcacccccggcgtggtcccctacttcgacctctccttccagcacgccagcggtccg
ctgctgcgccgtatgcgccgtttcggtgaccgtgagcgcttcctggagctgctggccacc
gcccgtgccaaggccccggaggccggggcccgctccaacttcatcgtcggcttccccggc
gagacggaggaggagttcgaggagctggtggccttcctgagcgaggcccgcctggacgcc
atcggcgtcttcggctactccgacgaggacggcaccgaggccgccggccatgccgacaag
gtcccggaggaggtcgtccaggaacgcgtggaccgcctcaaccgactggccgaggagctc
atggcccagcgggccgaggagcgcatcggtgacgaggtgaccgtcctggtggagtccgtc
atcgaggacggcgtctacgagggacggtccgagcaccaggcccccgaggtcgacggcagc
accatcctgtacggcgaggggctctccgtcggcgacctggtgcgcgcgaccgtgatccag
gcggccggcgccgacctcgtcgccgagcaggacggggaagccggggacagatga
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