KEGG   Nocardiopsis alba: B005_3576
Entry
B005_3576         CDS       T02218                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
nal  Nocardiopsis alba
Pathway
nal00300  Lysine biosynthesis
nal00470  D-Amino acid metabolism
nal01100  Metabolic pathways
nal01110  Biosynthesis of secondary metabolites
nal01120  Microbial metabolism in diverse environments
nal01230  Biosynthesis of amino acids
Module
nal_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nal00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    B005_3576 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    B005_3576 (dapF)
Enzymes [BR:nal01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     B005_3576 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AFR10616
UniProt: J7LD61
LinkDB
Position
3753214..3754029
AA seq 271 aa
MRFAKGHGTENDFVILPDPDGELELTKEDVRSLCDRRAGIGGDGVLRVVRTRVLGETLAP
AARTAERAEWFMDYRNADGSIAEMCGNGVRVFARYLLHVGLVDSDRFEIGTRDGAKGVTV
EANGDITIDMGRVERQGVSSAGLARGVVHGAQISVGNPHLACEIDEPVADLDLSRPPELD
ADDFPEGANVELYNRVAPGVLDMRVYERGSGETRSCGTGIVATAAAATPEGQSATWRVRV
LGGECTVELDASGARLSGPAVIVAEGETSLI
NT seq 816 nt   +upstreamnt  +downstreamnt
atgcgattcgccaagggccacggaacagagaacgacttcgtgatcctccccgacccggac
ggggagctcgaactcacgaaggaggacgtccggtcactgtgcgaccgccgagcgggcatc
ggcggcgacggtgtcctacgagtggtgcgcacgcgtgtgctcggcgagacgctggccccg
gccgcgcggaccgccgaacgggccgagtggttcatggactatcgcaacgcggacggcagc
atcgcggagatgtgcgggaacggggtccgggtcttcgcccgctacctgttgcacgtcggc
ctcgtcgactcggaccgtttcgagatcgggacccgtgacggggccaagggggtcaccgtc
gaggcgaacggcgacatcaccatagacatggggcgcgtggagcgtcagggcgtctcctcg
gccgggctcgcccgcggggtcgtccacggagcccagatctccgtgggcaacccgcacctg
gcctgcgagatagacgagccggtcgccgacctcgacctgtcccgcccgcccgaactcgac
gcggacgactttcccgagggagccaacgtcgagctgtacaaccgggtcgcccccggtgtg
ctggacatgcgcgtgtacgagcgcggctccggcgagacccgttcctgcgggaccggaatc
gtggccaccgcggccgcggcgacccccgaagggcagagcgccacctggcgtgtccgtgtc
ctgggaggcgagtgcaccgtcgagctggacgcctccggcgcccgtctgagcggccccgcc
gtcatcgtcgccgagggcgagacctccctgatctga

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