Nocardiopsis alba: B005_3599
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Entry
B005_3599 CDS
T02218
Name
(GenBank) bacterial extracellular solute-binding family protein
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
nal
Nocardiopsis alba
Pathway
nal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B005_3599
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nal02000
]
B005_3599
Transporters [BR:
nal02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
B005_3599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AFR09274
UniProt:
J7LEK5
LinkDB
All DBs
Position
complement(3779151..3780374)
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AA seq
407 aa
AA seq
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MSAVAGIAAIALTASACGGDGDAGDTSAPTLVIWSDPERADAVQSAAAAFGEANGIEIDV
QNVSFDDIQGDVVNAHQAGNAPDIFVGAHDWAGNLMRNGTVQPIDLPADREAALDETALE
AMTLEGRLLGVPYTQENIFLMRNTELAPDAPETFEELVEIGTGLKEAGEAEEVLAMAVGQ
EGDPYRMNALMTSAGGYLFGQDSEGDWDPEDLGIGSDETIEAMELIAEYGEAGEGVLRRS
IDLENEAALFFDGKAPFFVAGPWTIGDAEASDIDYEISAIPGFEGKDPAAPYIGYQAFFV
TDGSPNSALAEEFVVNHVTDPDFILSLYEADPRTPVQLEALETISAENPAIATMAETGEN
GMPMPNIPEMGETWDPLGIAQARIIGGEDVRESLETAHETVAERIGG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcggtcgccggaatcgccgcgatcgcgttgacggcgagcgcgtgcggcggcgac
ggtgacgccggtgacacgagcgcccccaccctcgtcatctggtccgaccccgagcgggcc
gacgccgttcagagcgccgccgccgcgttcggcgaggccaacggcatcgagatcgacgtc
cagaacgtctccttcgacgacatccagggcgacgtcgtcaacgcccaccaggcgggcaac
gcccccgacatcttcgtcggcgcccacgactgggccggcaacctcatgcgcaacggcacg
gtgcagccgatcgacctgcccgccgaccgcgaggccgcgctggacgagaccgcgttggag
gccatgaccctggagggacggctactcggcgttccgtacacgcaggagaacatcttcctc
atgcgcaacaccgagctggcgcccgacgcccccgagaccttcgaggagctcgtggagatc
ggcacggggctcaaggaggccggagaggccgaggaggtcctggccatggcggtcggacaa
gagggcgacccctaccggatgaacgcgctcatgacctccgccggcggctacctgttcggg
caggactccgagggcgactgggaccccgaggacctgggcatcggctccgacgagaccatc
gaggccatggagctgatcgccgaatacggcgaggccggcgagggcgtgctgcgccgctcc
atcgacctggagaacgaggcggccctcttcttcgacgggaaggcccccttcttcgtggcg
ggcccctggaccatcggcgacgccgaggcctccgacatcgactacgagatcagcgccatc
cccggcttcgagggcaaggaccccgcggccccctacatcggctaccaggccttcttcgtg
accgacggcagccccaacagcgccctcgccgaggagttcgtggtcaaccacgtcaccgac
cccgacttcatcctctccctgtacgaggccgacccgcgcaccccggtccagctcgaagcc
ctcgagacgatctccgccgagaaccccgccatcgccacgatggccgagaccggcgagaac
ggcatgcccatgcccaacatccccgagatgggcgagacctgggacccgctgggcatcgcc
caggcccggatcatcggcggcgaggacgtccgtgagtctctggagaccgcccacgagacc
gtcgccgagcggatcggcggataa
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