Nocardiopsis alba: B005_3828
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Entry
B005_3828 CDS
T02218
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nal
Nocardiopsis alba
Pathway
nal00061
Fatty acid biosynthesis
nal00071
Fatty acid degradation
nal01100
Metabolic pathways
nal01212
Fatty acid metabolism
nal02024
Quorum sensing
nal04146
Peroxisome
Module
nal_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
B005_3828
00071 Fatty acid degradation
B005_3828
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
B005_3828
09145 Cellular community - prokaryotes
02024 Quorum sensing
B005_3828
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nal01004
]
B005_3828
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nal04147
]
B005_3828
Enzymes [BR:
nal01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
B005_3828
Lipid biosynthesis proteins [BR:
nal01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
B005_3828
Exosome [BR:
nal04147
]
Exosomal proteins
Exosomal proteins of breast milk
B005_3828
Exosomal proteins of breast cancer cells
B005_3828
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFR07531
UniProt:
J7L4A2
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All DBs
Position
complement(4018838..4020706)
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AA seq
622 aa
AA seq
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MPDTSSPYRSIPDMFASRVAESGTREAFTHPVPSPDGGPETWRTLTWNQARDRVRDLALG
LHSLGLTSQARCAIASNTRIEWILADLAILCAGGASTTIYPSSTPPDFAYIVSDSGSMLA
FAEDDEQVAKLREQRGAMPGLSRVIAFEGAAGGDDDWVMGLDELEALGARRHAEDPGLFD
ELVAAVRPEHLATLIYTSGTTGRPKGVRLDHANWLYEAQALQALDEELRAQGRGLLTGDD
VQFLWLPLAHAFGKLMQVSQLRLGFVTAVDGRVDRIVDNLSVVRPTFMAAAPRIFEKVYA
KVVTQAQEGGEAKYRIFRWAADVGDRVARLRERGEEPTGLLAARHRIADRLVFSRLRARF
GDRLRFLVSGSAPLAPEIGRFFSGAGITILEGYGLTETSAGSFLNRPGEARFGSVGLPLP
GTEVKIAEDGEVLLRGGGVMRGYHNLSGATEAVLTEEGWFATGDIGTLEDGHLRITDRKK
ELIKTSGGKYVAPQSIENRFKALCPYASNLVVHGDRRPYCVGLVALDPEAIEEWAENNGL
GALNYVGLTREPKVRRMVQEAVDELNKGLPRHETIKDFAILPNGLTVEGGEITPSLKMRR
RAVEEKYADLLDGLYEKAPRRS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacacctcatccccctaccgatccatccccgacatgttcgcctcccgcgtcgcc
gaatccggtacgcgggaggcgttcacccaccccgtcccctcccccgacggcggccccgag
acctggcggaccctgacctggaaccaggcacgcgaccgtgtgcgcgacctggccctgggg
ctgcactccctcggcctgacctcccaggcccgatgcgccatcgcctccaacacccggatc
gaatggatcctcgccgacctggcgatcctgtgcgcgggcggtgcctccaccacgatctac
ccctcctccaccccgcccgacttcgcctacatcgtgtccgactccggcagcatgctggcc
ttcgccgaggacgacgagcaggtcgccaaactgcgcgaacagcgcggggccatgcccggc
ctgtccagggtgatcgccttcgaaggcgccgctgggggagacgacgactgggtcatgggc
ctggacgagctggaggccctcggcgcccgtcggcacgccgaggacccgggactgttcgac
gagctggtcgcggcggtccgccccgaacacctggccaccctgatctacacctcgggcacc
accggccgccccaagggcgtgcggctggaccacgcgaactggctgtacgaggcccaggcg
ctccaggcactggacgaggagctgcgcgctcaggggcgggggctgctcaccggcgacgac
gtgcagttcctgtggctgcccctggcccacgccttcggcaagttgatgcaggtgagccag
ttgcgtctgggtttcgtcaccgccgtggacgggcgggtggaccgcatcgtcgacaacctg
tccgtcgtacggccgaccttcatggccgcagcccctcgcatcttcgagaaggtgtacgcc
aaggtcgtcacccaggctcaggagggcggcgaggccaagtacaggatcttccgttgggcc
gcggacgtgggcgaccgggtggcgcggctccgggagaggggcgaggagccgaccggcctg
ctcgccgcccggcatcggatcgccgaccgactcgtgttctcccggctgcgcgcccgcttc
ggcgaccggctgcgcttcctcgtctccggcagcgcccctctggccccggagatcggccgg
ttcttctccggtgccgggatcaccatcctggagggctacgggctgaccgagacctccgcc
ggttccttcctcaatcgtccgggcgaggcgcgtttcggcagtgtcgggctgcccctgccc
ggaaccgaggtcaagatcgcggaggacggcgaggtgctgttgcgcggcggcggggtgatg
cgcggataccacaacctgtccggcgccaccgaggccgtgctcaccgaggagggctggttc
gcgaccggtgacatcggcaccctggaggacggccacctgcggatcaccgaccgcaagaag
gagctgatcaagacctccggcggcaagtacgtggcgccgcagagcatcgagaaccgtttc
aaggccctgtgcccgtacgcgagcaacctggtcgtgcacggagatcggcgcccctactgc
gtgggcctggtcgccctggaccccgaggcgatcgaggagtgggcggagaacaacggtctg
ggcgcgctgaactacgtcgggctgaccagggagccgaaggtcaggcgcatggtccaggag
gccgtcgacgagctcaacaaggggctgccccgccacgagacgatcaaggacttcgcgatc
ctgccgaacggactgaccgtggagggcggagagatcacgccgagcctgaagatgcgccgc
cgggcggtggaggagaagtacgccgacctgctcgacgggttgtacgagaaggcgccccga
cgttcctga
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