Nocardiopsis alba: B005_3902
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Entry
B005_3902 CDS
T02218
Name
(GenBank) pseudouridine synthase family protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
nal
Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nal03009
]
B005_3902
Enzymes [BR:
nal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
B005_3902
Ribosome biogenesis [BR:
nal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B005_3902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AFR07120
UniProt:
J7L6S1
LinkDB
All DBs
Position
4094419..4096179
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AA seq
586 aa
AA seq
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MSTTDNDRPRGERGGYAPRGERGDYDDRGGRGRRSFDRDDRRGGGRPDRDRGGFRGDRDR
RDDRGGRSYDRRDDRGGRSFDFDRDERPRRDDRDRGGFRGDRDRRDDRGGRSFERRDDRR
GGFQGRRDDRDRGGRSFDRDDRGGRSFERRDDRRGGGGRFDRDERPRRPDRDRGGFRGDR
DRRDDRGGRSYDRRDDRGGRSFERRDDRRGGGGRFDRDERPRRDDRDRGGRSFDRDDRGG
RSHDRRDDRRGGGRPQDRRDDRRGGGGRFDRDERPRRDDRRSSGRDDRRDRYQGRRDQAP
AGGAVKSENQLSKAARERLNALRADYDPRDEDRHSGEDRDTYTDVPDGIRLQKALAAAGV
ASRRASEEMIAAGRVSVDGQIVRRFGARVDPEASEIRVDGMRVVTAPDKLYFALNKPRGV
VSTMWDPQGRPTLADYTGQTEERIFHVGRLDTETEGLILLTNDGELANRLTHPRYKVIKT
YIAKVPGPVPHRVVREIEKGIELEDGPVEVDSFRVVDNDSQQAMVEIRLHEGRKHIVRRL
MEEVGHPVTDLARTQVGPIDLNTLRLGTMRALSSREIGELYKVAGL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaactgataacgaccgtccccgcggtgagcggggcggatacgccccgcgcggt
gagcgcggcgactatgacgaccgaggcggccgaggccgccgttccttcgaccgtgacgac
cgccggggtggcggacgtcccgaccgggaccgtggtgggttccgtggtgaccgtgatcgg
cgtgacgatcgtggtggccgttcctatgaccgtcgtgacgaccgtggtggtcgttccttc
gacttcgaccgtgatgagcgtccgcgccgcgacgaccgggaccgcggtgggttccgcggt
gaccgtgaccgtcgcgatgaccgtggtggtcgttccttcgagcgacgcgacgaccggcgt
ggtggtttccagggacgccgtgacgaccgggatcgcggtggtcgctccttcgaccgtgac
gaccgtggtggtcgttccttcgagcggcgtgacgatcggcgtggtggcggtggccgtttc
gaccgtgatgagcgcccgcgccgtcccgaccgggaccgtggtgggttccgtggtgaccgt
gatcgtcgcgatgaccgtggtggccgttcctatgaccgtcgtgacgaccgtggtggtcgt
tccttcgagcggcgtgatgaccggcgtggtggcggtggccgtttcgaccgtgatgagcgt
ccgcgccgtgacgaccgggaccgcggtggccgttccttcgaccgtgacgaccgcggcggt
cgttcccacgatcgtcgtgacgaccgacgcggcggtggccgtccccaggaccggcgtgac
gatcggcgtggtggcggtggccgtttcgatcgtgacgagcgcccgcgccgcgacgaccgt
cgttcctccggccgcgacgaccgtcgcgaccgctaccagggacgtcgcgaccaggccccg
gccggtggcgcggtcaagagcgagaaccagctctccaaggcggcccgtgagcgtctcaac
gcgctgcgcgccgactacgacccgcgcgacgaggaccgtcactccggcgaggaccgtgac
acctacacggacgtccccgacggcatccgtctacagaaggccctcgcggccgccggtgtc
gccagccgtcgcgccagcgaggagatgatcgccgccggtcgcgtcagcgtcgacggtcag
atcgtccgtcgcttcggcgcccgggtggacccggaggcctccgagatccgggtcgacggc
atgcgtgtggtcaccgccccggacaagctgtacttcgcgctgaacaagccgcgtggcgtg
gtcagcaccatgtgggacccccagggtcgtccgaccctggccgactacacggggcagacc
gaggagcgcatcttccacgtgggtcggctggacaccgagaccgagggtctgatcctgctg
accaacgacggtgagctcgccaaccggctcacgcacccgcgttacaaggtcatcaagacc
tatatcgcgaaggtgcccggcccggtgccgcaccgtgtggtgcgcgagatcgagaagggc
atcgagttggaggacggccccgtcgaggtcgactccttccgcgtggtcgacaacgacagc
cagcaggccatggtggagatccgactccacgaggggcgcaagcacatcgtgcgtcgtctc
atggaggaggtgggccacccggtcacggacctggcccgtacccaggtcggcccgatcgac
ctgaacaccctgaggctgggcacgatgcgcgcgctgagctcgcgtgagatcggcgaactg
tacaaggtcgcgggtctgtga
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