Nocardiopsis alba: B005_3999
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Entry
B005_3999 CDS
T02218
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nal
Nocardiopsis alba
Pathway
nal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B005_3999 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nal03400
]
B005_3999 (ung)
Enzymes [BR:
nal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B005_3999 (ung)
DNA repair and recombination proteins [BR:
nal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B005_3999 (ung)
Prokaryotic type
B005_3999 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFR09325
UniProt:
J7LD34
LinkDB
All DBs
Position
complement(4190471..4191145)
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AA seq
224 aa
AA seq
DB search
MATRDLTEIMDSGWAKALEPVAPQIAAMGDFLRQEVAEGRTYLPAGDNVLRAFQQPFDQV
RVLIMGQDPYPTPGNAVGLSFSVAPDVRLPASLRNIYKEMGEDLGTTMPSNGDLTPWTEQ
GVLLLNRVLTVAPGKAGSHRGKGWEAITEQAIRALAERGGPLVAILWGRDARNLRPMMPG
VPCVESAHPSPLSARNGFFGSRPFSRTNELLVEQGAEPVNWQLP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacgggacctcactgagatcatggacagcggctgggcgaaggcgttggagccg
gtcgccccacagatcgccgctatgggcgacttcctccgccaggaggtcgccgaaggacgc
acctatctgcccgcgggcgacaacgtcctgcgcgccttccagcagcccttcgaccaggtg
cgcgtgctcatcatggggcaggacccctaccccacccccggcaacgcggtcgggctgagc
ttctcggtggccccggacgtgcgtctgcccgcgagcctgcgcaacatctacaaggagatg
ggcgaggacctgggcaccacgatgccctccaacggcgacctcaccccctggaccgagcag
ggcgtgctgctgctcaacagggttctgaccgtcgcccccggcaaggccggttcgcatcgg
ggcaagggctgggaggccatcaccgagcaggccatccgggcgttggccgagcgcggcgga
ccgctcgtggcgatcctgtggggccgcgacgcccgcaatctgcgcccgatgatgcccggc
gtcccgtgtgtggagtcagcccacccgagccctctctcagcccgtaacggcttcttcggc
tcccggccgttcagcaggaccaacgagctgctggtcgaacagggcgccgaaccggtgaac
tggcagctcccctag
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integrated database retrieval system
