Nocardiopsis alba: B005_4106
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Entry
B005_4106 CDS
T02218
Symbol
pafB
Name
(GenBank) pafB domain protein
KO
K24033
proteasome accessory factor BC
Organism
nal
Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nal03051
]
B005_4106 (pafB)
Proteasome [BR:
nal03051
]
Prokaryotic proteasome
Bacterial regulatory particles
B005_4106 (pafB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WYL
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
AFR07860
UniProt:
J7L8T6
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All DBs
Position
4324855..4326858
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AA seq
667 aa
AA seq
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MSRRKTERQLNLVICLLSTRRHLTAQEIRKTVQGYAEAETESAFKRMFERDKRELRDSGI
PIQVGTGDAFSGEEGYRISRSDYELSEIELMPDEALVLGLAARAWRHASLGEAAANALFK
LRSAGVPVDAEAAPGLTPTMRTDEPAFGPIWQAVRDRRPVVFSYRKPGQAEPQRREIEPW
GIVNRSGHWYVVGHDRLREDRRVFRLGRIQGEVTVVRTGPDVSVPAGVDLRSVVSEQSVE
PEHTATVRVRADSAHALRRSALRVVPGEREGGERAWDTLTLPYTDTATLVRRVAEQGANA
EVVEPAQARAAVAAHLAGIVAAPTGEPGPRAEPVEGETPGRGPRSADQLRRLLMLVPYAL
GRDVRVPEVARHFGLSEKQVVSDLSLLWMCGLPGYTPGDLIEVDLDAAKETGEIIIGNAE
TLAQPLRLTADEAASLVVGLSLLEALPEAQGVEGEVLKRVGEKLRGAAGTAVGDLADAVQ
VRVETDEQVAQTRRRCSQALEAGQRMHLRYLSGYLDQVTERDVDPMGLVVQDGQTFLEGY
CHLRQDVRLFRLDRVLELTVLPYAAQVPEGVGRRDLSKGILQRSDRDALVTLALEPSARW
VTEDYVCESVVESADGGVFATLRTPAPAWVARLALSLGAEGRVVSPTNLADEVRSEAERA
LKPYEEG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaggaagaccgaacggcagctcaacctggtcatctgcctgttgtccacgcgg
cgccacttgaccgctcaggagatcaggaagacggtccaggggtacgcggaggccgagacc
gagtcggccttcaagcgcatgttcgagcgcgataagagggaactgcgcgacagcggcatt
ccgatccaggtgggaaccggtgacgccttcagtggagaggagggttaccgcatctcccgc
tcggactacgaactgtccgagatcgaactgatgcccgacgaggccctcgtactgggcctg
gcggcacgggcctggcggcacgcctctctgggggaggcggcggccaacgccctgttcaag
ctgcgttcggccggcgtcccggtggacgccgaggccgcccccgggctgaccccgaccatg
cggaccgacgagccggccttcggccccatctggcaggcggtgcgggaccgacgtccggtc
gtcttctcgtaccgcaaaccggggcaggccgaaccgcagcggcgtgagatcgagccgtgg
ggcatcgtgaaccggagcggtcactggtacgtggtcggccacgatcggctgcgagaggac
cgtcgggtcttccggctcgggcggatccagggcgaggtgaccgtggtgcgcaccggcccg
gacgtgagcgtacccgccggtgtcgatctgcgttcggtggtctcggaacagagcgtcgaa
cccgagcacaccgccaccgtgcgggtgcgggccgactccgcgcacgccctgcgccgtagc
gcactgcgtgtggtcccgggggagcgtgagggcggggaacgggcctgggacaccctcacc
cttccctacaccgacaccgcgaccctggtgcggcgggtggccgagcagggggccaacgcc
gaggtcgtggagcccgcccaggcgcgcgccgccgtggccgcccacttggcgggcatcgtc
gcggccccgacgggggagcccgggccgagggccgagccggtggagggcgagacccccgga
cgcggcccccgttcggccgaccagttgcgccggttgctgatgttggtcccctacgcgctg
gggcgcgacgtccgggtgcccgaggtggcccggcacttcggcctcagcgagaagcaggtg
gtgtcggacctgagcctgctgtggatgtgcgggctgcccggctatacgccaggcgacctc
atcgaggtggacctggacgccgccaaggagaccggcgagatcatcatcggcaacgccgag
accctggcccagccgctgcggctgaccgcggacgaggcggccagcctggtggtgggcctg
tccctgctggaggcgctgcccgaggcccagggggtggagggcgaggtcctcaagcgggtg
ggggagaaactgcgcggcgccgccggtacggccgtgggcgacctggccgacgcggtccag
gtcagggtggagaccgacgagcaggtggcgcagacccggcggcgctgttcccaggctctg
gaggccggacagcgtatgcacctgcgctacctgtcgggctacctggaccaggtcaccgaa
cgcgatgtggacccgatggggctggtggtgcaggacggtcagacgttcctggaggggtac
tgccacctgcgtcaggacgtgcgcctgttccgcctggaccgggtactcgaactgacggtg
ctgccctacgcggcccaggtgcccgagggtgtggggcgcagggacctgtccaaggggatc
cttcagcgctccgaccgcgacgccctggtcaccctggccctggaaccgtccgcccgttgg
gtcaccgaggactacgtgtgcgagtcggtcgtcgagtcggccgacggcggggtcttcgcg
accctgcgcaccccggccccggcctgggtggcgaggctggcgttgtccctgggggccgag
ggacgtgtggtgtctcccacgaacctggccgacgaggtgcggagcgaggcggagcgggct
ctgaagccctacgaggaagggtga
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