Nocardiopsis alba: B005_4147
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Entry
B005_4147 CDS
T02218
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nal
Nocardiopsis alba
Pathway
nal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B005_4147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nal02000
]
B005_4147
Transporters [BR:
nal02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
B005_4147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AFR10396
UniProt:
J7LCG3
LinkDB
All DBs
Position
4369362..4371110
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AA seq
582 aa
AA seq
DB search
MRKRALGFVALGAAASLFLSACGGAATGGGGSDSDGSFDLGSTEVVNPSDKTGGTLKYAI
AGDFDSTDPANTYYAFNWNFSRYYARTLLAFNPAPGEGATELIPDMAVDLPEPNDDFTEW
TVKIQEGLKYEDGTEITAEDIKYGIARANFNGGVFTEGPQYFKAHLDQDDHNVYEGDDPL
AGFDSIETPDDYTLVFHLKDSFSEFPNVLTQPQTAPVPIEADRGELYQEHVLSSGPYKFD
GDYEPGVKLNLERNEHWDADTDAVRPALPDRIEVEIGVNQDEIDERLVSGELDVDLSGTG
VGPAMHSRLLDDEAIQGNLDNPYTGALRYVNIHLPVIEDVACRQAIMYAADRDSMWRAWG
GAEGGDIATNLLPPAIPGSDTESDLYPSADNKGDLDKAREKLEECGEDDGFKTNIAVRVE
REKDVQTAEALQQALGEVGIEAEIKSFPSADFFGQYAGSQDYVRENNIGMSVSGWGPDWP
TGYGFASKITHGDAIMETGNFNTSELDDPEVNGLWDEALKTEDPDERAEIYGRIDTLVME
NAAILPVVFDKALMYRSDDLTNVYYTPAYMMYDFMAIGVDRD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ttgaggaaaagagccctcggcttcgtcgcgctcggcgcggccgcatccctcttcctgtcc
gcctgcggcggcgccgccaccggcggtggcggttccgactcggacggcagcttcgacctc
ggttccaccgaggtcgtcaacccgtcggacaagaccggtggcaccctgaagtacgccatc
gccggcgacttcgactccaccgaccccgccaacacctactacgcgttcaactggaacttc
tcccgttactacgcgcgtacgctgctggccttcaacccggctccgggtgagggcgccacc
gagctgatcccggacatggccgtggacctgccggagcccaacgacgacttcaccgagtgg
accgtcaagatccaggaaggcctcaagtacgaggacggcaccgagatcacggccgaggac
atcaagtacggcatcgcccgtgccaacttcaacggcggcgtgttcaccgagggcccgcag
tacttcaaggcccacctggaccaggacgaccacaacgtctacgagggcgacgacccgctc
gcgggcttcgactccatcgagaccccggacgactacaccctggtcttccacctcaaggac
tccttctccgagttcccgaacgtgctgacccagccgcagaccgccccggtgccgatcgag
gccgaccgcggtgagctgtaccaggagcacgtcctgtcctcgggcccgtacaagttcgac
ggcgactacgagcccggcgtcaagctcaacctggagcgcaacgagcactgggacgccgac
accgacgccgtgcgcccggccctgccggaccgcatcgaggtcgagatcggcgtcaaccag
gacgagatcgacgagcgtctggtcagcggcgagctcgacgtcgacctctccggcaccggc
gtcggcccggcgatgcactcgcgtctgctcgacgacgaggccatccagggcaacctggac
aacccgtacacgggcgccctgcgctacgtgaacatccacctccccgtcatcgaggacgtg
gcctgccgccaggcgatcatgtacgccgccgaccgcgacagcatgtggcgcgcctggggc
ggcgccgagggcggcgacatcgccaccaacctgctgcccccggcgatcccgggctccgac
accgagtcggacctgtacccgtccgcggacaacaagggcgacctcgacaaggctcgggag
aagctcgaggagtgcggcgaggacgacggtttcaagaccaacatcgccgtccgcgtcgag
cgcgagaaggacgtccagaccgccgaggcccttcagcaggccctgggcgaggtcggcatc
gaggctgagatcaagagcttcccgtccgccgacttcttcggtcagtacgccggttcgcag
gactacgtccgtgagaacaacatcggcatgagcgtctccggctggggtccggactggccc
accggttacggcttcgcctccaagatcacgcacggcgacgcgatcatggagaccggtaac
ttcaacacctccgagctggacgaccccgaggtcaacggtctctgggacgaggccctcaag
acggaggacccggacgagcgcgccgagatctacggccgcatcgacaccctcgtcatggag
aacgccgccatcctgccggtggtcttcgacaaggccctgatgtaccgctccgacgacctg
accaacgtctactacacgcccgcctacatgatgtacgacttcatggcgatcggcgtggac
cgggactag
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