Nocardiopsis alba: B005_4539
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Entry
B005_4539 CDS
T02218
Name
(GenBank) helicase conserved C-terminal domain protein
Organism
nal
Nocardiopsis alba
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DUF1631
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AFR09382
UniProt:
J7LFN9
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All DBs
Position
complement(4752111..4755110)
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AA seq
999 aa
AA seq
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MRVLHGVWSGGTLTIWAEGEAHADRPPGVHPFAAGLPDLRDLVDSLGIDPSSPAATEPTL
FLPGGAEAPARSDSTDTTPSEPRPWRVPALELSPADADLLLCALTNPSSVALGPALAHLG
AVHAFAERLVGAGCVLPDLVGAPPRARWRPAPSDTAEEHLAALSATLPPAATAHLTARDR
ADADRLCVLAPLELLTDAVARRLSTGRGRPSETEDVPPSPEARLAAALTGSRTRVDEETA
AALRGPLREWRSRVRGAGRARLLFVLREPEPEGPRHGPRPWTLEFWVRSTTDPGLRLPLE
QVWSGEGGAWLPEDVASTALADLRRAARHYPALGRVLGALAPDRLTMDTLGAQDFVGTHA
ARLAAAGFSVVLPEWSGRDGLGLRMTVDEPPKRRGRGGVSPSDLVDVSFEALLNGPENEA
PLTGEELAELAELARLKRSLVRVRGRWMEVDPESVASALELMRRSGRGRMRRDEALRTAI
GVAETAPLPVTDVVADGPLGALLDGGAKAEPRPMGTPAGFEGSLRPYQDRGASWLRFLGE
LGLGAVLADDMGLGKTVQLLALLTDERADGPAPGPTLLVCPVSLVGNWRREAERFAPGLR
VHVQHGPDRPSGNALARIVGHCDLVVTTYGVVARDAEELSGMPWHRVVCDEAQALKNHDT
RQARAVRSLPAATRIALTGTPVENNLGELWSVMEFANPGLLGTSADFQRTVADRAEAEGG
EGEGTDLVRRLTGPFVLRRLKTDRSIIADLPDKHQMRTWCTLTPEQASLYKAVVDEMGER
MAEADEKERKGLVLATMSRLKQICNHPAQFLGDGSALAGRSGKLERLESILGEAVAEGDK
ALCFTQYARWGERLTPYLRSRLGVPVLWLHGGTSRVDRERMTERFQTMAGPAVFLLSLKA
AGTGLNLTAANHVVHVDRWWNPAVENQATDRAFRIGQRRDVQVRKMVCVGTVEERVDEMI
ERKSALADGVVTTGEQWLSGLSVEDLREVVRLAPEAVAG
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggtactgcacggcgtgtggtccgggggcacgttgacgatctgggccgagggcgag
gcccacgccgaccgtcccccgggtgtccatcccttcgccgccggccttccggacctgcgc
gacctggtcgacagcctcggcatcgatccctcttctccggccgccaccgagccgaccctg
ttcctgcccggcggcgcggaggcccccgcgcgctccgactcgaccgacaccacgccctcg
gaaccccgcccctggcgtgtcccggccctggaactgtccccggccgacgccgacctcctc
ctgtgcgcgctcacgaacccgtcgtccgtcgccctcggccccgcgctcgcccacctgggc
gccgtccacgccttcgccgaacgactggtcggggccggctgcgtcctccccgacctggtc
ggcgccccgccccgggcccgatggcgacccgccccctcggacaccgccgaggagcacctg
gccgcgctgtccgcgacgcttccccccgccgccaccgcccacctgacggcgcgggatcgg
gccgacgccgaccggctctgtgttctggcgccgttggaactgctcaccgacgcggtcgcg
cgccggctgtccaccggacgaggccgaccttccgagaccgaggacgtccctccctcaccg
gaggcccgcctcgccgccgcgctcaccggatcgcgtacccgcgtggacgaggagaccgcc
gccgccctgcgcggcccgttgcgggaatggcgttcccgggtccggggcgccggtcgggcg
cgactgctgttcgtcctgcgcgagcccgaacccgagggtccccgtcacggcccccgcccc
tggaccctggagttctgggtgcgttcgaccaccgaccccggtctgcgactgcccctggaa
caggtgtggtcgggcgagggcggcgcctggctgcccgaggacgtggcctccaccgccctg
gccgacctgcgtcgggccgcgcgccactaccccgccctgggccgggtgctcggcgccctg
gccccggaccggctcaccatggacaccctcggagcgcaggacttcgtcgggacccacgcc
gcccggttggccgccgcgggtttctccgtggtgctgcccgagtggagcggacgcgacggt
ctcgggctgcgcatgaccgtcgacgaaccgccgaagcggcgggggcgtggcggggtgagc
ccctcggacctggtggacgtctccttcgaggcgttgttgaacggtcccgagaacgaggcc
ccgctgaccggggaggagctcgccgaactggcggaactggcccggctcaaacgttccctg
gtgcgggtgcgcggacggtggatggaggtggaccccgagagtgtcgcctccgccctggaa
ctgatgcgccgttccgggcgaggacggatgcgccgcgatgaggcgctccgcacggcgatc
ggcgtcgccgagaccgccccgctcccggtgaccgacgtggtggccgacggaccgctgggg
gccctgctcgacggcggggccaaggccgaaccccgaccgatgggcaccccggccggcttc
gaggggagtctgcgcccctaccaggatcgcggcgcctcctggctccggttcctgggggag
ctgggcctgggcgcggtgctcgccgacgacatggggttgggcaagaccgttcagcttctg
gccctgctcaccgacgaacgcgccgacggccccgcgccggggccgaccctgctggtgtgc
ccggtctccctcgtcggcaactggcggcgcgaggccgagaggttcgcccccgggctccgc
gtacacgtccaacacgggcccgatcggccttcggggaacgcgttggcgcggatcgtgggc
cactgcgatctggtggtgaccacctacggcgtggtggcgcgtgacgccgaggaactgtcg
gggatgccctggcaccgggtggtgtgcgacgaggcgcaggcgttgaagaaccacgacacc
cgccaggcgcgggcggtgcgttccctgcccgccgcgacccggatcgcgctcaccggcacc
ccggtcgagaacaacctgggcgagttgtggtcggtgatggagttcgccaaccccgggctc
ctcggcacctccgccgacttccagcgaacggtggccgaccgcgccgaggccgagggcggc
gaaggggagggcaccgacctggtgcgccggttgaccgggccgttcgtgctgcgccgtttg
aagaccgaccggtcgatcatcgccgacctgccggacaagcaccagatgcgcacctggtgc
acgctcacccccgaacaggcctcgctgtacaaggccgtggtggacgagatgggcgaacgc
atggccgaggccgatgagaaggagcgcaaggggctggtgctggcgaccatgtcccgcctc
aaacagatctgcaaccatccggcacagttcctgggcgacggttcggcgttggccgggcgg
tccggcaagctggagcgactggagtcgatcctcggcgaggcggtggccgagggcgacaag
gccctgtgcttcacccagtacgcgcgttggggcgaacgtctgacgccctacctgcgctcc
cgactcggggtaccggtgctgtggttgcacggcggcacctccagggtcgaccgggaacgc
atgaccgagcgtttccagaccatggccggccccgcggtcttcctgctctcgctcaaggcg
gccgggaccgggctgaacctgacggcggccaaccacgtggtgcacgtggaccgctggtgg
aacccggccgtggagaaccaggccaccgaccgggccttccggatcggccaacgccgggac
gtgcaggtgcgcaagatggtgtgcgtgggcaccgtggaggaacgggtggacgagatgatc
gaacgcaagagcgcgctggccgacggcgtggtgaccaccggcgagcagtggctgagcggg
ctgtcggtggaggacctgcgcgaggtcgtgcggttggcgcccgaggcggtggcgggatga
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